Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0851 ATGAGGGTCTTTGAATCAAGAAAAGTATCATTTGCCAGTACAGAGAGAATGTACAATCATCAGCAACAACAAGCAAAGAACATTCACTCTTTAAGGACGTCCAACCCTCCTGAGAGGCATATGATGGTCCATGGTGGAAGTGGAAATGCAGACTCAGGACTCGTCCTCTCAACTGATGCTAAGCCAAGGCTAAAATGGACACTAGATCTCCATGAACGCTTTGTAGAGGCAGTCAACCAGCTAGGAGGGCCAGATAAAGCTACACCAAAAACAGTATTGAAACTTATGGCGATTCCTGGACTTACTCTATACCACTTAAAAAGTCATCTACAGAAATACAGACTCAGTCAAAATTTGCATGGACAGGGCAATAGTGGAACCCATAGAAACGAAGTAGCCAGCCAAACGTCTGAGACAAGTGGAGTCCGTATGGAAAATTTTAGCATCAGACTTCAGCCAAACAAGAACCTAGAAATAAATGAGGCACTACAGATGCAAATTGAAGTGCAAAGAAGGCTGCATGAACAGCTCGAGGTACAGAGACACTTGCAGCTTCGTATAGAGGCTCAAGGGAAGTATCTCCAAGGAGTGCTGGAGAAAGCCCAAGAAACATTAGAGATACAGAATCTTGGCACATCAGGGCTTGAAGCTGCTAAGGTTCAACTCTCTGAACTGGCATCCAAAGTATCAACTCATTACATAGAGCCTGCATTTTCAGAGCTGAAAGAATTACAGGCAATTTGGCCTCAGCAAGCACAAGTGGTGACCAAAACCACCAATTGTAGTGAAGGATCTCAGAGAGGCCAAGACACACATTACACGGGTTTAAATTTGAGATTATGTGAAGGAACTCCATTTTTAAGATCGAAAGAGGGGACACAAAAGCCTGTTCTTCTGAAGTCTGATCTCACATTATGTGATCAGCTGCAGGAGAAAATGCTGTTTCTTTCCCCACCAAATGATGAACATAAAAAAAACTCAAAACTCGTATCCATGGATGTTGAACTTGAAGGAGAAGAAGAAAGCTTGGGGAAACCGCATGTTTTGAAGGAAGAGGAAGAAAGCTGGTTGTTGAGAAAGGAGAGAGCAGAAAATGGGGTTGTGACAGGTAAACTGAACTATGGGAAAATTTCTCAAGACTATAGGATGTCTAACTATGAAACCACACTGGACCTAAATGTTCATGATAAAAATGATGCTTCTTCTAACTGCCAACAGTTTGACTTGAATGGATTTGGCTGGAATTGCTAG 1251 0.4221 MRVFESRKVSFASTERMYNHQQQQAKNIHSLRTSNPPERHMMVHGGSGNADSGLVLSTDAKPRLKWTLDLHERFVEAVNQLGGPDKATPKTVLKLMAIPGLTLYHLKSHLQKYRLSQNLHGQGNSGTHRNEVASQTSETSGVRMENFSIRLQPNKNLEINEALQMQIEVQRRLHEQLEVQRHLQLRIEAQGKYLQGVLEKAQETLEIQNLGTSGLEAAKVQLSELASKVSTHYIEPAFSELKELQAIWPQQAQVVTKTTNCSEGSQRGQDTHYTGLNLRLCEGTPFLRSKEGTQKPVLLKSDLTLCDQLQEKMLFLSPPNDEHKKNSKLVSMDVELEGEEESLGKPHVLKEEEESWLLRKERAENGVVTGKLNYGKISQDYRMSNYETTLDLNVHDKNDASSNCQQFDLNGFGWNC 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0851 416 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 118 IPR017930 -
Acco02g0851 416 FunFam Myb family transcription factor 60 118 - -
Acco02g0851 416 Pfam Myb-like DNA-binding domain 63 114 IPR001005 -
Acco02g0851 416 Pfam MYB-CC type transfactor, LHEQLE motif 158 204 IPR025756 -
Acco02g0851 416 Coils Coil 160 180 - -
Acco02g0851 416 NCBIfam myb-like DNA-binding domain, SHAQKYF class 61 116 IPR006447 GO:0003677
Acco02g0851 416 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 34 287 IPR044848 GO:0003700
Acco02g0851 416 MobiDBLite consensus disorder prediction 118 139 - -
Acco02g0851 416 Gene3D - 60 118 - -
Acco02g0851 416 SUPERFAMILY Homeodomain-like 60 117 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0851 Acco-ChrAcco02 6017724 6020276 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0851 93 415 G2-like Transcription Factor Family AT3G04030 43.020 1.72e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco02g0851 Myb_DNA-binding 2.2e-07 CL0123