Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0849 ATGGCGGCAGCACTGGTGGACAAAGGAGAGGCGGAGGCCCTGGATTTGCCTCCGGGTTTCAGGTTTCATCCGACTGACGAGGAGATCATTACTTGTTATCTGACGGAGAAGGTGCTGAACAGCAGTTTCAGTGCAACTGCAATCGGTGAAGCTGATTTCAATAAGTGTGAGCCTTGGGATTTGCCCAAGAGGGCGAGGATGGGGGAGAAAGAGTGGTTCTTCTTCTGTCAAAGGGACCGGAAATATCCGACGGGGACGAGAACGAATAGAGCGACGGAGTCCGGGTACTGGAAGGCTACCGGAAAAGATAGGGAGATATACAGAGGGAAAGACAACCTGGTGGGGATGAAGAAGACCCTCGTCTTCTACAGAGGGAGGGCTCCCAAAGGCGACAAAACTGGCTGGGTTATGCATGAATTCCGATTAGAGGGCCAATTCGCCACTTACAACCTCCCCAGGGCAGCTAAGGATGAATGGGTGGTGTGCAAGATTTTCCACAAGAACACTGACGTAAAAAGGATTCCTGAGCTTCTAAGGATCAACTCTCTCAGCGATCACCTTGTTGATTTCTCTTCCTCGCTCCCGCCTCTCATGGAGCATCCTTCTTTCACCAACGCCGACCAGCCCGGCTACAGTGATTGTGGCCATGAATTCAAGGATCAACCGTCATTTTATTACCCCGACTTCGCCGCCAACAATCAGACGACGGTGATGAAGGTGGAACAACAAGACTACAGAAACTGTGAGATGATGACGATGATCCCCAGTTACTGCACCGGCGACGCCAGTCATAATCCTCTCTCGCGAGGAACAATCCATAATAATCCGAGTTTGTGGGCTGAGCAGAATAATGTTGTGATGTCGGATTACAGGAACAGAGATGTGATGGGAGGTGGCGTGAAGAATGAAACGATGTCGTGGGGAATGGATAAACAGTGCAATATGGAGCATTCTTCGATGGTGAGTGCGTCGCAGGATACCGGCGGCGTAAGCAATGACAGAAACGCCGAAACATCCTCGGCGGTGTCAGCTAGGAGAGACATCCTAGGAAGGAATAAGACAGCGTACGAGGATGACTTCATCCTCCACAAGCCTCCATCACTTGGTTCCTTTCCAGATTTGGGCCACCTCTGGGATGACTACTGA 1146 0.5105 MAAALVDKGEAEALDLPPGFRFHPTDEEIITCYLTEKVLNSSFSATAIGEADFNKCEPWDLPKRARMGEKEWFFFCQRDRKYPTGTRTNRATESGYWKATGKDREIYRGKDNLVGMKKTLVFYRGRAPKGDKTGWVMHEFRLEGQFATYNLPRAAKDEWVVCKIFHKNTDVKRIPELLRINSLSDHLVDFSSSLPPLMEHPSFTNADQPGYSDCGHEFKDQPSFYYPDFAANNQTTVMKVEQQDYRNCEMMTMIPSYCTGDASHNPLSRGTIHNNPSLWAEQNNVVMSDYRNRDVMGGGVKNETMSWGMDKQCNMEHSSMVSASQDTGGVSNDRNAETSSAVSARRDILGRNKTAYEDDFILHKPPSLGSFPDLGHLWDDY 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0849 381 SUPERFAMILY NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Acco02g0849 381 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 274 - -
Acco02g0849 381 Gene3D NAC domain 25 172 IPR036093 GO:0003677|GO:0006355
Acco02g0849 381 ProSiteProfiles NAC domain profile. 16 167 IPR003441 GO:0003677|GO:0006355
Acco02g0849 381 Pfam No apical meristem (NAM) protein 17 142 IPR003441 GO:0003677|GO:0006355
Acco02g0849 381 MobiDBLite consensus disorder prediction 322 341 - -
Acco02g0849 381 FunFam NAC domain-containing protein 100-like 25 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0849 Acco-ChrAcco02 5997377 5998814 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0849 3 211 NAC Transcription Factor Family AT5G18270 66.667 7.05e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco02g0849 NAM 1.4e-38 No_clan