Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0848 ATGAAACCTCCCCAGGCCAATCTCCCACCTGGTTTCAGGTTCCACCCCACCGACCATGAACTTATCCTTCACTATCTCAGCAAGAAGGTCGCTTCTTTGCCCCTCCCCGTCTCCGTCATTGCCGACGTCGATATCTACAAGTTCGATCCTTGGGACTTACCAGGAAAGGCCGCGTTTGGAGAGAGAGAATGGTACTTCTTCAGTCCGAGGGACCGAAAGTACCCCAATGGAGCGAGGCCAAACAGGGCGGCTGTTTCTGGGTATTGGAAGGCCACTGGCACTGACAAGCACATCGCTCCCCCATCACTGCCTGCTTCAGCACGGCACGCCATTGGTGTAAAGAAAGCTCTCGTTTTCTACAAAGGAAAGCCACCAAAAGGCGTCAAGACCAATTGGATCATGCACGAATATCGCCTCGCTCACTCCAACACCAAACCCATTAAGCTCAGAGACACCTCCATGAGGCTAGATGATTGGGTTTTGTGCCGGATATACCACAGGTCTAAGAATGACACGTCATCGTCGTCTACCCCAGAGGCTCTGGTCACCGTGGCTGATCAAGCACAGGATCAGCAGCAGCTTCTCAAGCAAGCCCTGTTGCCGGCATCAACCAGTAGTACCATGAATCCCCATGTTCTTCCTCATTCCACCACGCTGGCATCCAACAAGTCTGTGTCTTTCTCCAATCTGTTAGATGCCATGGACTACTCTATGCTGAGCAGCCTCTTGTCTGATCAGAGCCATTCCATCCCCACTGCTCCGGCCTCTGTTACCAGTGCCGGCGGCGGCAATATTCTGGATCACCACTTAACTGTGCCTTCAGCCCCAAACTTGGAACATGGCTGGCCCAAACGGCAGCTTCCTGACGTGGACGAGGAAACCTTGTACCCATCCAAGAAATTCCAGCTCAGTTCTTGCAGCTTCCCAGAAACCAGCCATGATCAATATGAGAATAATAATCTGCAATGGAATCTTCTCCATAAACAGCACTTGATGAATCAGCAATTACTTCTGGGTCCTCACATTCGATTTCAGGGATGA 1041 0.5149 MKPPQANLPPGFRFHPTDHELILHYLSKKVASLPLPVSVIADVDIYKFDPWDLPGKAAFGEREWYFFSPRDRKYPNGARPNRAAVSGYWKATGTDKHIAPPSLPASARHAIGVKKALVFYKGKPPKGVKTNWIMHEYRLAHSNTKPIKLRDTSMRLDDWVLCRIYHRSKNDTSSSSTPEALVTVADQAQDQQQLLKQALLPASTSSTMNPHVLPHSTTLASNKSVSFSNLLDAMDYSMLSSLLSDQSHSIPTAPASVTSAGGGNILDHHLTVPSAPNLEHGWPKRQLPDVDEETLYPSKKFQLSSCSFPETSHDQYENNNLQWNLLHKQHLMNQQLLLGPHIRFQG 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0848 346 Gene3D NAC domain 17 172 IPR036093 GO:0003677|GO:0006355
Acco02g0848 346 SUPERFAMILY NAC domain 5 167 IPR036093 GO:0003677|GO:0006355
Acco02g0848 346 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 7 232 - -
Acco02g0848 346 FunFam NAC transcription factor 56 17 172 - -
Acco02g0848 346 ProSiteProfiles NAC domain profile. 8 167 IPR003441 GO:0003677|GO:0006355
Acco02g0848 346 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0848 Acco-ChrAcco02 5979831 5981057 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0848 2 346 NAC Transcription Factor Family AT3G04070 48.179 1.94e-100 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco02g0848 NAM 9e-39 No_clan