Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0825 ATGAGTTTTCAAGATATCCAAGGCGGGGCCAAGCGACCCGCTTCCCGAACTCAATCGCCGTCGCAGGCGGTGGCTGCCGGAATTTTCCAGATCAATACAGGCGTCGCCACTTTCCGACGACTCGTTGATGCCATCGGGACCGTCAAAGACACCGTCGGTCACCGCCACAAGCTGCACGAAACGAGGCAGCGGATATTGCAGCTGGTGAAGGATACTTCTGCAAAGCTCAAAGCCTTGAGCGAATCCGATCTTGCTGCCGATGCCGATTCTGGTAAGAAAATTGAAGATGCTAAACTGGCGAGAGATTTTCAAACCACATTGCAAGAATTCCAGAGAGTGCAACAGCTTGCTTCTGAGCGTGAATCTACCTACCTTCCTGCTGCTCCTACTTCTTCTTTACCTGCAAGCTCTGGCTCTGTTGGGGAATCAACTGACATAGATCAGGAAAGTCAACTTTTAATCAGGGAACAGAAAAGGCAGGAGATACTCTTATTAGATAGTGATATTGCATTCAATGAGGCCATGATTGAAGAAAGAGAGCAGGGCATCAAGGAAGTAGAGGTGCAAATTGGACAAGTAAATGAAATTTTCAAGGACCTAGCCGTTCTGGTTCATGAACAGGGGGTGGTTATTGATGATATTCAATCAAATATTGAGGCTTCTGCGGGTTCAACAACCCAGGCTACTACACAGCTAGCCAAGGCTTCCAAAAATATGAAATCTAAAAGTTCATGGTGTTGGTGGGTGCTTATAATTCTTGTTATAGTGGTGGTCGTGGTTCTTATTTTTCTCATTATTTAG 801 0.4619 MSFQDIQGGAKRPASRTQSPSQAVAAGIFQINTGVATFRRLVDAIGTVKDTVGHRHKLHETRQRILQLVKDTSAKLKALSESDLAADADSGKKIEDAKLARDFQTTLQEFQRVQQLASERESTYLPAAPTSSLPASSGSVGESTDIDQESQLLIREQKRQEILLLDSDIAFNEAMIEEREQGIKEVEVQIGQVNEIFKDLAVLVHEQGVVIDDIQSNIEASAGSTTQATTQLAKASKNMKSKSSWCWWVLIILVIVVVVVLIFLII 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0825 266 SUPERFAMILY t-snare proteins 18 228 IPR010989 GO:0016020|GO:0016192
Acco02g0825 266 Gene3D - 9 132 - -
Acco02g0825 266 Gene3D - 170 266 - -
Acco02g0825 266 CDD SNARE_Qa 176 234 - -
Acco02g0825 266 PANTHER SYNTAXIN 22 255 IPR045242 -
Acco02g0825 266 SMART SynN_4 9 122 IPR006011 GO:0016020
Acco02g0825 266 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 173 235 IPR000727 -
Acco02g0825 266 MobiDBLite consensus disorder prediction 123 143 - -
Acco02g0825 266 FunFam Syntaxin-22 like 15 128 - -
Acco02g0825 266 MobiDBLite consensus disorder prediction 1 21 - -
Acco02g0825 266 Pfam SNARE domain 210 261 IPR000727 -
Acco02g0825 266 SMART tSNARE_6 168 235 IPR000727 -
Acco02g0825 266 Pfam Syntaxin-like protein 25 124 IPR006011 GO:0016020
Acco02g0825 266 FunFam Syntaxin-22 like 166 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0825 Acco-ChrAcco02 5826413 5828595 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0825 1 253 SNARE and Associated Proteins AT5G46860 56.977 4.30e-93 273