Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0813 ATGTCAGGGTCTCTTGCAGCGATAGTAGGAGGAGCTGCAGGGGCCGTGGCATTGGTAGGGATAGTTATAGCACTCATATGCTTCCGCCTATCTCGCAGGAGGAGTGTCTCAAGGACTTCAGAGACAGGGTCCTCTGATCCCTCCCAAGTGGGAAGACATGGCGGGATTGAGTTGACTTTCCGGGATACCAGGCGGTTTGAGATGGAAGAACTATCTCAGGCCACGAAGAATTTCAGTGACAAAAATTTGATTGGAGAAGGGAAGTTTGGAGAGGTTTACAAAGGCTTACTTCATGATGGTATGCTTGTGGCCATCAAAAAGAGGCAGGGACTTCAGAGCCAGGACTTTGTTGACGAGGCTCGCTACCTCTCATCCATTCACCATCGGAATCTTGTGACTCTCTTGGGCTACTGCCAGGAACAAAATCTGCAGTTTCTTATATATGAATATGTGCCTAATGGGAGCGTCTCTAGTCACTTGTATGGTGCTGGTCAACAATCGAAAGAGAAGCTAGAATTCAAGCTTAGACTTTCAATAGCTGTTGGTGCAGCTACAGGTTTGGCTCATATTCATTCCTTGAGCCCCCGTTTGGTGCACAAAAATTTCAAAACAGCAAATGTTCTCGTGGATGAAAATTTCATTGCTAAGGTTGCAGACGCTGGGCTGCGTAATTTCCTGGGAAGAGTTGATATTGCAGGGTCATCTTCTCAAGTGGCAGCAGATGAGATATTCCTTGCTCCCGAGGTTAGAGAGTTCAGACGATTTTCTGAAAAGAGTGATGTATACAGTTTTGGGGTATTTTTGTTGGAACTATTAAGTGGGAAGGAAGCTACAGAACCTCCAACTTCGGACTCTAGTCAGAATCTAGTTGAATGGGTGCAAGTTAGTGAAGACCATCGCATTATGTCTAACATCGTTGATCAGAGATTGGGGAGCAGTTTCACAGCGGAAGGCATGGAAGAGTTTATTTTGCTGGTAGCTCGATGTTTGAGCCCTTCAAGTGAGAGAAGACCTTCCATGAGTTATGTTGTCATGGAACTTGAACGGATTCTTGAGAAGGAAATGAACTTGACGACAATGATGGGCGAAGGCACCCCAACTGTGACCCTTGGAAGTCAGTTATTCAAAGCAACAAGGTAA 1140 0.457 MSGSLAAIVGGAAGAVALVGIVIALICFRLSRRRSVSRTSETGSSDPSQVGRHGGIELTFRDTRRFEMEELSQATKNFSDKNLIGEGKFGEVYKGLLHDGMLVAIKKRQGLQSQDFVDEARYLSSIHHRNLVTLLGYCQEQNLQFLIYEYVPNGSVSSHLYGAGQQSKEKLEFKLRLSIAVGAATGLAHIHSLSPRLVHKNFKTANVLVDENFIAKVADAGLRNFLGRVDIAGSSSQVAADEIFLAPEVREFRRFSEKSDVYSFGVFLLELLSGKEATEPPTSDSSQNLVEWVQVSEDHRIMSNIVDQRLGSSFTAEGMEEFILLVARCLSPSSERRPSMSYVVMELERILEKEMNLTTMMGEGTPTVTLGSQLFKATR 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0813 379 Gene3D Transferase(Phosphotransferase) domain 1 151 365 - -
Acco02g0813 379 FunFam Protein kinase superfamily protein 43 150 - -
Acco02g0813 379 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 12 356 IPR047117 -
Acco02g0813 379 ProSiteProfiles Protein kinase domain profile. 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0813 379 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Acco02g0813 379 FunFam Protein kinase superfamily protein 151 364 - -
Acco02g0813 379 SUPERFAMILY Protein kinase-like (PK-like) 58 355 IPR011009 -
Acco02g0813 379 Gene3D Phosphorylase Kinase; domain 1 51 150 - -
Acco02g0813 379 Pfam Protein tyrosine and serine/threonine kinase 82 347 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0813 Acco-ChrAcco02 5738601 5741063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0813 4 373 Receptor kinase-like Gene Family AT3G46290 36.709 2.18e-65 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Acco02g0813 PK_Tyr_Ser-Thr 5.2e-42 CL0016