Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0803 ATGTATCGCCACGCACATGCACAATTATATATGGACAAAGGCAATCTCCTCGGCAAGGGGTGTTGTCGTGATACACTGATGCCGACGAAGCCACAGCCCTGCACAGTTCGCTGCCACGTGCATGGAAAGAGAGCTCTACCGTCTGATCACGATGCATCAGAGGCCAATAAAAGAGAAAGTTCATTCATGTCTCAGGCTCACACATCACCATCTGATCAGACCCAAAAGGAGGAAGAGACTTCACCTCGTTCTACTTTTTCGTATCTTATCAGCACCAGTACTGATACTAAAATCTCACATGGTCAAGTTATAAGCACTTCTACTGGGCTGATCCAGAACCAGGCGGACCCATCTCAGCCTACACATCAAGATCAAGGCAACAATAATAATGTGAGAAAAAGGAGCTATAGAGGAGTAAGGCAGAGACCATGGGGAAAATGGGCAGCCGAAATCCGAGACCCTAAAAAAGCAGCCAGAGTGTGGCTTGGCACCTTCGAGACCGCCGAGGATGCAGCCGCTGCTTATGATGCTGCTGCTTTAAGGTTCCGAGGAAGCAAAGCGAAGCTTAATTTCCCCGAACGTGTTTCTTTAGCTGCTTCTTCAGCCATCCCTCCGTCGCAAACCCAGCTTCCGGCCGCTCCTTCCACAGCGGCACAAACGGTGTCTCGGCCTCTAGCACCGTCAACAGACGAAGGGTTCCCGAATCTATTGCAGTACGCGCAGCTGCTTCGTGGTGGTGGTGGTGGTGGTGATTACCAGCAAAGAGCTGCTTCGGGACTTTATAGTTATCAGAATGAACTATTATTTCTTCGTGATTCTTCTTCTCCGTCATTCTCGCCATCATCAGGAGTGTTTTCTTCGTCTGCTTCTCTATCTGGGTCTGATCAACAACAGGTTCAAGATCCCCAGACAGCTCAAAAGGGAGATTATGGTTCTTCTTCTGGTTCTTATTTTTTTGATGGAGGAAACACGAGGGGATGA 981 0.4883 MYRHAHAQLYMDKGNLLGKGCCRDTLMPTKPQPCTVRCHVHGKRALPSDHDASEANKRESSFMSQAHTSPSDQTQKEEETSPRSTFSYLISTSTDTKISHGQVISTSTGLIQNQADPSQPTHQDQGNNNNVRKRSYRGVRQRPWGKWAAEIRDPKKAARVWLGTFETAEDAAAAYDAAALRFRGSKAKLNFPERVSLAASSAIPPSQTQLPAAPSTAAQTVSRPLAPSTDEGFPNLLQYAQLLRGGGGGGDYQQRAASGLYSYQNELLFLRDSSSPSFSPSSGVFSSSASLSGSDQQQVQDPQTAQKGDYGSSSGSYFFDGGNTRG 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0803 326 SMART rav1_2 135 198 IPR001471 GO:0003700|GO:0006355
Acco02g0803 326 Gene3D AP2/ERF domain 134 194 IPR036955 GO:0003700|GO:0006355
Acco02g0803 326 CDD AP2 136 193 IPR001471 GO:0003700|GO:0006355
Acco02g0803 326 MobiDBLite consensus disorder prediction 202 229 - -
Acco02g0803 326 MobiDBLite consensus disorder prediction 202 226 - -
Acco02g0803 326 PANTHER DNA-BINDING DOMAIN 74 286 IPR044808 GO:0003700|GO:0009873
Acco02g0803 326 MobiDBLite consensus disorder prediction 274 326 - -
Acco02g0803 326 MobiDBLite consensus disorder prediction 46 84 - -
Acco02g0803 326 MobiDBLite consensus disorder prediction 112 134 - -
Acco02g0803 326 Pfam AP2 domain 136 184 IPR001471 GO:0003700|GO:0006355
Acco02g0803 326 MobiDBLite consensus disorder prediction 112 139 - -
Acco02g0803 326 SUPERFAMILY DNA-binding domain 136 193 IPR016177 GO:0003677
Acco02g0803 326 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Acco02g0803 326 PRINTS Ethylene responsive element binding protein signature 158 174 IPR001471 GO:0003700|GO:0006355
Acco02g0803 326 FunFam Ethylene-responsive transcription factor 2 134 193 - -
Acco02g0803 326 ProSiteProfiles AP2/ERF domain profile. 135 192 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0803 Acco-ChrAcco02 5696340 5698285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0803 99 211 AP2-EREBP Transcription Factor Family AT5G61890 64.407 1.03e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco02g0803 AP2 6.3e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0803 02 5696340 5698285 Acco02g0803 02 5696340 5698285 ECH
Acco04g2338 04 39641071 39644840 Acco02g0803 02 5696340 5698285 ECH