Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0802 ATGGATTGGCGTGAGCTTCCAATGGCGAATCTGTTACTTCTTTTGCTGTTCCTTTCTGGAGCAATCTTGTGTGGGCAGTCCAAGTTCATAATGTATAACACCTCGCAGAGCATAGTTCCTGGTAAGCTAAACGTTCATCTGGTTCCTCACACCCACGACGACGTTGGTTGGTTGAAGACTGTTGATCAGTACTATGTTGGCTCCAATAATTCGATTCAGGGTGCTTGTGTTCAAAATGTATTAGACTCCTTAGTTCCTTCGCTGTTGGCTGACAAGAATCGGAAATTTATCTACGTTGAGATAGCCTTTTTTCAGCGATGGTGGAGGGACCAGAGTGAAGCTGTTAAGCATGTAGTTAAGCAACTTGTCAGTTCGGGTCAATTAGAGTTCATAAATGGTGGCATGTGTATGCATGATGAGGCAGCAACTCATTATATAGACATGATTGATCAGACAACGATGGGACATCGATTCCTGAAAGAAGAGTTTGGTGTGATTCCTAGAATTGGTTGGCAAATTGATCCCTTTGGACATTCTGCTGTGCAGGCATACTTATTGGGATCTGAAGTTGGCTTCGACTCACTTTTCTTTGGCCGAATAGATTATCAAGATAGAGATAAGCGGAAAAATGAAAAGAGTCTTGAGGTTATCTGGCAGGGAAGTAAGAGCCTTGGCTCGTCTGCTCAGATCTTTGCTGGTGCATTCCTTGAAAATTATGAGCCACCTGCTGGATTTTACTTTGAAGTTAATGATAATTCACCAATTGTTCAAGATAACATTGATTTATTTGATTACAATGTCCAAGATCGAGTAAATGATTTTGTTGCTGCTGCTGTATCACAGGCAAACATTACTCGAACAAATCATATAATGTGGACTATGGGAACTGATTTTAAGTATCAATATGCAAACTCATGGTTCCGGCAGTTGGACAAGCTTATTCACTATGTCAACAAGGATGGACGTGTCAATGCCCTCTACTCTACTCCATCTATATATACTGATGCAAAATATGCCACAAAAGAGACATGGCCATTAAAGATTGACGATTTCTTCCCCTATGCAGATCGAGTAAATGCTTACTGGGCAGGATACTTTACCAGTAGGCCAGCTTTCAAATACTATGTCAGATTAATGAGTGGCTATTATTTGGCGGCAAAACAGCTAGAACTTTTCAAGGGGAGGATGAATTCAGGACCAAATACTGACTCATTGGCTGATGCTTTAGCGGTTGCTCAACACCATGATGCAGTCTCTGGTACTGAAAAGCAGCATGTGGCCAATGATTATTCTAAACGATTATCAATTGGCTACAAAGAGGCGGAGCAATTAGTTGCATCATCACTTGCTTGCCTGGTTGAGTCTTTGTCATTAACAGGATGTCAGAACCCAGTTACCAAGTTTCAACAGTGTCCGCTTATGAATATAAGTTACTGCCCTCCATCAGAAGTTGATCTGATTCAAGGGAAAAATTTGGTTATTGTGGTTTACAACTCTCTTGGCTGGAGGAGGAATGAAGTGGTTCGAATTCCTGTCAGTAATGAAGATGTTATAGTTTATGATTCTGAGGGTAAAGAAATAGTGTCGCAACTTCTACCTCAGGCTGAGGTCTATGCATCCTTAAGAAACTACCATGTCATGGCATATCTGGGAGAAACTCCAGCCAAGGCACCCAAGTATTGGCTTGCATTTACAGTATCTGTGCCACCTCTTGGTTTTAGCACATATACAGTCTCAGCTGCCAAAGAAACAGGTCCTACCAGATCATCTGTGTATACATATCAAACTAGTGAAACATCCAAAATTGAAGTTGGTCAAGGGAATTTGAGGCTTACATTTTCTCCAAATCAAGAAAAGTTTACCAACTATGTTAATACCAGGAACTCGGTTGAGGAACAGATTAAACAGAGTTATTTGTACTACTCAGCATATAATGGAACTGATGATGAAGTGCCACAGAACTCTGGTGCATATATATTCCGTCCAAATAACACATATCTCTTAAAGCATGAAAGACAGGTGCCATTGACTGCTATGCGTGGACCCTTACTAGATGAAGTACATCAACAGATAAATCCATGGATTTATCAGATTACCAGACTGCACAAGCAAAAAGAGCATGTTGAAGTCGAGTTTATTGTTGGCCCCATTCCTATTGATGATGGAATTGGTAAAGAAGTTGTCACTAGGATTTCAACCTCAATGGAAACCAACAAATCATTCTATACAGATTCTAATGGGCGAGATTTTATCAAAAGGATACGTAATTACAGATCAGACTGGGACCTTGAAGTGAACCAGCCTATTGCTGGAAACTATTATCCTATTAATCTTGGGATATACGTAAAAGATAATTCTACAGAATTTTCAGTTTTGGTGGATCGATCTGTGGGAGGATCCAGCTTAGCTGATGGACAAATAGAGCTAATGGTTCACAGGAGACTGCTACTTGATGATTCAAGAGGTGTTGCAGAGGCTTTAAATGAAACAGTCTGTGTTTTCGATGATTGCAAAGGCCTAATAATCCAAGGAAAAGTATACTATAGAATAGATCCCCTGGGCGAGGGTGCTAAGTGGCGTCGTACAGTTGGCCAGGAAATATATTCTCCACTACTCATGGCCTTTTCTGAACAGGAAGGAGATGACTGGATAAATTCCCATATACTTACATATTCAGGAATTGATTCTAATTACAGCTTACCGGACAACGTTGCAATTATATCCTTTCAGGAACTAGATGGTGGAAAAGTTCTCCTTCGGTTAGCACATCTATACGAGATTGACGAAGACAAGGATCTCTCTGCAATGGCAAGTGTGGAGCTGAAAAAGCTGTTCCCAAGGAAAAAGATCAAAGAGGTGCAAGAGATGAGTTTATCTGCGAATCAAGAAAGGACAGATATGGAGAAAAAAAGACTTAAGTGGAAAGTAGAAGGCTCTTCTGGTTCTGGGGACAAACGAGTTCTCAGGGGAGGGCCTGTTGATCCTGAAGAGCTATCTGTGGAGCTCGGCCCAATGGAAATCCGCACCTTTATCGTTTACTTTGAATATGAATCTCACACAAAAGCTTTTGCTGTTTAA 3078 0.4084 MDWRELPMANLLLLLLFLSGAILCGQSKFIMYNTSQSIVPGKLNVHLVPHTHDDVGWLKTVDQYYVGSNNSIQGACVQNVLDSLVPSLLADKNRKFIYVEIAFFQRWWRDQSEAVKHVVKQLVSSGQLEFINGGMCMHDEAATHYIDMIDQTTMGHRFLKEEFGVIPRIGWQIDPFGHSAVQAYLLGSEVGFDSLFFGRIDYQDRDKRKNEKSLEVIWQGSKSLGSSAQIFAGAFLENYEPPAGFYFEVNDNSPIVQDNIDLFDYNVQDRVNDFVAAAVSQANITRTNHIMWTMGTDFKYQYANSWFRQLDKLIHYVNKDGRVNALYSTPSIYTDAKYATKETWPLKIDDFFPYADRVNAYWAGYFTSRPAFKYYVRLMSGYYLAAKQLELFKGRMNSGPNTDSLADALAVAQHHDAVSGTEKQHVANDYSKRLSIGYKEAEQLVASSLACLVESLSLTGCQNPVTKFQQCPLMNISYCPPSEVDLIQGKNLVIVVYNSLGWRRNEVVRIPVSNEDVIVYDSEGKEIVSQLLPQAEVYASLRNYHVMAYLGETPAKAPKYWLAFTVSVPPLGFSTYTVSAAKETGPTRSSVYTYQTSETSKIEVGQGNLRLTFSPNQEKFTNYVNTRNSVEEQIKQSYLYYSAYNGTDDEVPQNSGAYIFRPNNTYLLKHERQVPLTAMRGPLLDEVHQQINPWIYQITRLHKQKEHVEVEFIVGPIPIDDGIGKEVVTRISTSMETNKSFYTDSNGRDFIKRIRNYRSDWDLEVNQPIAGNYYPINLGIYVKDNSTEFSVLVDRSVGGSSLADGQIELMVHRRLLLDDSRGVAEALNETVCVFDDCKGLIIQGKVYYRIDPLGEGAKWRRTVGQEIYSPLLMAFSEQEGDDWINSHILTYSGIDSNYSLPDNVAIISFQELDGGKVLLRLAHLYEIDEDKDLSAMASVELKKLFPRKKIKEVQEMSLSANQERTDMEKKRLKWKVEGSSGSGDKRVLRGGPVDPEELSVELGPMEIRTFIVYFEYESHTKAFAV 1025
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0802 1025 CDD GH38N_AMII_LAM_like 43 319 - -
Acco02g0802 1025 PANTHER ALPHA-MANNOSIDASE 14 1015 - -
Acco02g0802 1025 Gene3D Glycoside hydrolase family 38, central domain 403 457 IPR037094 GO:0004559|GO:0006013
Acco02g0802 1025 Pfam Glycosyl hydrolases family 38 C-terminal domain 606 821 IPR011682 GO:0004559|GO:0006013
Acco02g0802 1025 Coils Coil 950 970 - -
Acco02g0802 1025 FunFam Alpha-mannosidase 889 1016 - -
Acco02g0802 1025 SUPERFAMILY Glycoside hydrolase/deacetylase 32 356 IPR011330 GO:0005975
Acco02g0802 1025 SMART Alpha_mann_mid_2 360 434 IPR015341 GO:0004559|GO:0006013
Acco02g0802 1025 FunFam Alpha-mannosidase 480 604 - -
Acco02g0802 1025 Gene3D Glycoside hydrolase 38, N terminal domain 43 323 IPR027291 -
Acco02g0802 1025 FunFam Alpha-mannosidase 322 402 - -
Acco02g0802 1025 Gene3D Glycoside hydrolase family 38, central domain 324 402 IPR037094 GO:0004559|GO:0006013
Acco02g0802 1025 Pfam Alpha mannosidase middle domain 360 452 IPR015341 GO:0004559|GO:0006013
Acco02g0802 1025 Gene3D - 603 869 - -
Acco02g0802 1025 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 904 1011 IPR041147 -
Acco02g0802 1025 SUPERFAMILY Families 57/38 glycoside transferase middle domain 360 457 IPR028995 -
Acco02g0802 1025 SUPERFAMILY Galactose mutarotase-like 462 1014 IPR011013 GO:0003824|GO:0005975|GO:0030246
Acco02g0802 1025 Gene3D - 889 1020 - -
Acco02g0802 1025 FunFam Alpha-mannosidase 603 869 - -
Acco02g0802 1025 FunFam Alpha-mannosidase 403 457 - -
Acco02g0802 1025 Gene3D - 480 602 IPR013780 -
Acco02g0802 1025 FunFam Alpha-mannosidase 43 323 - -
Acco02g0802 1025 Pfam Glycosyl hydrolases family 38 N-terminal domain 44 355 IPR000602 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0802 Acco-ChrAcco02 5666265 5680135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0802 6 926 Glycoside Hydrolase AT5G13980 69.903 0.0 1372