Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0798 ATGATCCTCATCTCTTCCCAGCTTACTGGTCCAAACACACACCCGCGCTCTGACGCAATGGAGGGAGAGATACCACCGATAGCTAACGTCGTCCCTTGGATGGAAGGAGAAGTTGGAGATGAAGCCTCTTGGACTAGAACTAACAACGACGGTGAGCTCAAGGACGACGACATTGTTTTGGGTGGCCCTCTAACCTCCTTCAAATCCATGCTTGAATGTGACTGGTACATGAATTCTGCTATCAATTTAGCTCACCAAGACCTCCTCAGTCTCCCCAATCCCCAAGAAACAACTGATATCGTCTTTTGTTCAAACCCAGCTGATAGTTTTCTCGTACAGCCAGTGGATTCGTCGTCTTCCTGTTCACCATCATTCACTCTTGACCCTTCTCAGTCACAGCACTTTTTACAGCCCAAATCTTCTTTCCCTTCCCTCTTCAATGTCATCTGCGACAACCCTTTTGGCAATGGCTTCGATTTGAGCTTTGACGGTGGTTTCCTTGGTCCGTTCCGTGGCCTTCATTCTTTGAATTCCTCTGTTTTGACGGATTTCTCGGGCTTGAACACTCAATCCCAGATGGGCAGCCTCGAACTGAGTTCAAACTCTGAGTTGCTAGCTTCTCGGCTGCTGCCAGCAGCTGAGAATGCAGTCTCGTTTGGCAGCGGATTTTGTCCGGCGGGTTTAGGAGGGTTTGATTATCCGGGAGGTGCTCTGTTGTTGAACCGGTCTAAGGTTTTGCGACCTCTTGAAGTTTCCCCTCCAGTAGGTGCGGCACCTACTCTCTTTCAGAAGCGAGCAGCGCTCCGCAATAGTTCACTTGGAACTGATAGATTGGGAACTTTGGAGATTTCAGCGTCGAGATTCGAAACTTGTTCTACAAGGCTGGAGAACATGGAGAGGAAGAGAAAGGGAATCGATGATGGCGAAATTGAGGAAGCTTCCATTGACGCATCGGCGCTGAACTATGATTCTGATGAGCTTAATGAGAGTGGTAAGATGGAGGAGAATGCTTATAATGCGGGGAGCAATTATAATGCCAATAGTTCAGTCTCTGGTGGAGACCAGAAGGGGAAGAAAAAAGGGCAGCCAGCCAAAAATCTAATGGCCGAGAGGCGGCGAAGAAAGAAACTAAATGATAGGTTGTACATGCTGAGGTCAATTGTGCCGAAGATTAGCAAGATGGACAGGGCTTCGATACTTGGGGATGCGATTGACTACTTGAAGGAGCTGCTGCAGCGGATTAATGATCTTCATAATGAACTGGAATCAACTCCGCCTGGCTCATTGCCACCACCTTCTACAAGCTTTCACCCTTTGACACCCACTCCACCAACACTTCCCTGTCGGGTCAAGGAAGAGCTTTGCCCTAGCCTCTTGCCAAGCCCTAAAAACCAAGCTGCAAGGGTGGAGGTTAGGCTAAGGGAAGGGAGAGCTGTCAACATCCATATGTTTTGTTCCCGCAGACCAGGTCTTTTGCTTTCCACCATGAGAGCTTTGGACAACCTTGGATTGGATGTTCAGCAGGCCGTTATCAGCTGTTTCAATGGCTTTGCTTTAGATGTGTTCAGAGCTGAGCAATGCGGAGAAGGGGTAGACGCGGTCCCTGAGCAAATCCAAGCAGTACTGATGGATTCAGCTGGTTTCCATGGTATGACATGA 1659 0.4876 MILISSQLTGPNTHPRSDAMEGEIPPIANVVPWMEGEVGDEASWTRTNNDGELKDDDIVLGGPLTSFKSMLECDWYMNSAINLAHQDLLSLPNPQETTDIVFCSNPADSFLVQPVDSSSSCSPSFTLDPSQSQHFLQPKSSFPSLFNVICDNPFGNGFDLSFDGGFLGPFRGLHSLNSSVLTDFSGLNTQSQMGSLELSSNSELLASRLLPAAENAVSFGSGFCPAGLGGFDYPGGALLLNRSKVLRPLEVSPPVGAAPTLFQKRAALRNSSLGTDRLGTLEISASRFETCSTRLENMERKRKGIDDGEIEEASIDASALNYDSDELNESGKMEENAYNAGSNYNANSSVSGGDQKGKKKGQPAKNLMAERRRRKKLNDRLYMLRSIVPKISKMDRASILGDAIDYLKELLQRINDLHNELESTPPGSLPPPSTSFHPLTPTPPTLPCRVKEELCPSLLPSPKNQAARVEVRLREGRAVNIHMFCSRRPGLLLSTMRALDNLGLDVQQAVISCFNGFALDVFRAEQCGEGVDAVPEQIQAVLMDSAGFHGMT 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0798 552 CDD bHLH_AtAMS_like 364 435 - -
Acco02g0798 552 MobiDBLite consensus disorder prediction 1 22 - -
Acco02g0798 552 FunFam BHLH transcription factor 357 425 - -
Acco02g0798 552 CDD ACT_UUR-ACR-like 481 541 - -
Acco02g0798 552 MobiDBLite consensus disorder prediction 338 373 - -
Acco02g0798 552 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 361 410 IPR011598 GO:0046983
Acco02g0798 552 Gene3D - 354 424 IPR036638 GO:0046983
Acco02g0798 552 MobiDBLite consensus disorder prediction 358 373 - -
Acco02g0798 552 Pfam Helix-loop-helix DNA-binding domain 366 410 IPR011598 GO:0046983
Acco02g0798 552 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 362 432 IPR036638 GO:0046983
Acco02g0798 552 MobiDBLite consensus disorder prediction 338 355 - -
Acco02g0798 552 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 263 548 - -
Acco02g0798 552 SMART finulus 367 416 IPR011598 GO:0046983
Acco02g0798 552 Coils Coil 404 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0798 Acco-ChrAcco02 5622512 5626734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0798 43 525 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 54.049 4.02e-147 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco02g0798 HLH 6.9e-10 No_clan