Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0788 ATGACCAACGGCCTGTTCATTATCTCTCATTCTCTTTTACCCTTTCCTCTGCGATCAGAGGTCCAACCCAGAGCTACAATGGCGACCAGATACTGGGTAGTCTCTCTCCCCGTTCAAAATTCCGTATCTGCTCTCTGGGCTCAATTGCAGGAACAAATCTCCAAGCACTCCTTCGATACTCCTCTTTACAGATTCAATATACCTAATCTCCGGGTTGGAACCCTAGATTCTCTTCTTTCTCTCAGCGATGATCTTGTGAAGGCAAACAGTTTCATGGAAGGAGTGTCACACAAGATCAGGCGACAGATTGAGGAATTGGAGAAAGTTGCTGGCGTTGTGAGCAGCGGGCTGACGGTTGATGGGGTGCCAGTCGATTCATACTTGACCAGGTTTGTTTGGGATGAAGCGAAGTACCCGACTATGTCACCTTTGAAGGAGATTGTGGATGGTATTCACGGTCAAGTGGCAAAGATCGAGGATGACCTGAAGGTTCGTGTTGCTGAGTATAACAATATCCGCAGTCAACTAAATGCTATCAACCGAAAACAAAGTGGAAGCTTATCTGTCCGTGATCTTTCCAACTTGGTAAAACCTGAGGATATTATAACTTCAGAACATTTAACTACCCTACTTGCAGTTGTTCCCAAGTATTCTCAAAAGGACTGGCTCTCAAGCTATGAAACGTTGACAAGCTATGTGGTACCCAGATCTTCCAAGCTGTTGTATGAGGATAATGAGTATGCTCTTTATACTGTAACCCTCTTCACACGTGTTGCAGACAACTTTAGAACTAGCGCACGTGAAAAAGGGTTCCAAATTCGTGATTTTGAGTACAGTCAAGAAACACATGAAAGTCGGAAGCAGGAGTTAGAGAAGTTGGTGCAAGATCAGGAAAGCTCAAGAGGAATTCTCTTGCAATGGTGTTATACAAGTTATGGAGAGGTTTTCAGCTCCTGGATGCACTTTTGTGCTATACGTGTATATACTGAGAGCATTCTGAGATATGGTTTGCCACCATCTTTCCTGGCAGCTGTGTTAGCTCCGTCTGCAAAAAGTGAGAAGAAAGTACGTTCAATACTTGAAAGCTTGTGTGACAGTGCAAACAGTGCATACTGGAAGACTGAGGATGAAGCAGGGGGTGGTATGGCCGGTCTAGCAGGGGATTCTGATGCACATCCATATGTTTCCTTCACAATCAATCTCGTATGA 1209 0.4458 MTNGLFIISHSLLPFPLRSEVQPRATMATRYWVVSLPVQNSVSALWAQLQEQISKHSFDTPLYRFNIPNLRVGTLDSLLSLSDDLVKANSFMEGVSHKIRRQIEELEKVAGVVSSGLTVDGVPVDSYLTRFVWDEAKYPTMSPLKEIVDGIHGQVAKIEDDLKVRVAEYNNIRSQLNAINRKQSGSLSVRDLSNLVKPEDIITSEHLTTLLAVVPKYSQKDWLSSYETLTSYVVPRSSKLLYEDNEYALYTVTLFTRVADNFRTSAREKGFQIRDFEYSQETHESRKQELEKLVQDQESSRGILLQWCYTSYGEVFSSWMHFCAIRVYTESILRYGLPPSFLAAVLAPSAKSEKKVRSILESLCDSANSAYWKTEDEAGGGMAGLAGDSDAHPYVSFTINLV 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0788 402 Gene3D Vacuolar atp synthase subunit c; domain 1 32 361 - -
Acco02g0788 402 Coils Coil 280 300 - -
Acco02g0788 402 Coils Coil 399 402 - -
Acco02g0788 402 Pfam V-ATPase subunit C 31 395 IPR004907 GO:0033180|GO:0046961|GO:1902600
Acco02g0788 402 CDD V-ATPase_C 31 399 IPR004907 GO:0033180|GO:0046961|GO:1902600
Acco02g0788 402 Gene3D - 67 338 - -
Acco02g0788 402 PANTHER V-TYPE PROTON ATPASE SUBUNIT C 28 401 IPR004907 GO:0033180|GO:0046961|GO:1902600
Acco02g0788 402 FunFam V-type proton ATPase subunit C 189 277 - -
Acco02g0788 402 Gene3D - 189 277 - -
Acco02g0788 402 SUPERFAMILY Vacuolar ATP synthase subunit C 27 401 IPR036132 GO:0015078|GO:0033180|GO:1902600
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0788 27 401 Primary Pumps ATPases(2) AT1G12840 82.133 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0788 02 5557188 5561412 Acco02g0788 02 5557188 5561412 ECH