Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0775 ATGGGAGATGCGGGAAGCATGTATCAGTACGAGCTGCTCAACCAGTCCTCGGCCTCCCCCAGGAGCCTCCGGAGGTCGTCATCACAGCCTTCTTCCCCTCGCATTTTTCAGTGCCGTTACTGCCCCCGCAAGTTCTGCACCTCCCAGGCCCTCGGCGGCCACCAGAACGCCCACAAGCGCGAGAGAGCCGCCGACCGTAACCTCACCCCCGCCGCCCTCCCCTCTCCCCCGCCTCACCCCATCCCCTCCCGCTTCTTCGACCCCTACTGGCTCCATGTTGACCCCATTCATCACTTCGCCCACCACCCTCCTCCCCCTCCCCCAAAGCCTTCCGATGCTCTCGTCGACCACGTCAACCACCTCGATCTCACCCTTCGCCTGTGA 384 0.6432 MGDAGSMYQYELLNQSSASPRSLRRSSSQPSSPRIFQCRYCPRKFCTSQALGGHQNAHKRERAADRNLTPAALPSPPPHPIPSRFFDPYWLHVDPIHHFAHHPPPPPPKPSDALVDHVNHLDLTLRL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0775 127 MobiDBLite consensus disorder prediction 9 34 - -
Acco02g0775 127 ProSitePatterns Zinc finger C2H2 type domain signature. 38 58 IPR013087 -
Acco02g0775 127 SUPERFAMILY beta-beta-alpha zinc fingers 33 63 IPR036236 -
Acco02g0775 127 MobiDBLite consensus disorder prediction 1 34 - -
Acco02g0775 127 ProSiteProfiles Zinc finger C2H2 type domain profile. 36 63 IPR013087 -
Acco02g0775 127 PANTHER ZINC FINGER PROTEIN JAGGED 16 104 IPR045320 GO:0003700
Acco02g0775 127 MobiDBLite consensus disorder prediction 51 80 - -
Acco02g0775 127 Gene3D Classic Zinc Finger 15 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0775 Acco-ChrAcco02 5475243 5475626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0775 28 89 C2H2 Transcription Factor Family AT5G14010 58.065 9.52e-16 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco02g0775 None None None