Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0747 ATGGAGACCTACCCTGTGTTATTTCCTTGCCCCGATCCTTCAACTTATTCAGTTTCTACTAGTGCCACGGGAGACTCTCACCTGCTTCGTGGTCCTAGCAATAACATGGAGGTGAGTCAGATTAATAACCCCAGTGGCTTCCTGGGTTTGAGACATGCTGCTGAAGGTGGCGACCAGTCGCAGAGAATTAGAGGATGTGAAAGCTTATCGAGGAATAATAAGGATGAGCAGCAAGGTGGTTCTGGGAAGAAGAAGGGTGAGAAGAAGGCGCGAAAACCTAGGTGTGCTTTTCAGACAAGGAGTCAGGTTGATATACTCGATGATGGATATCGGTGGAGGAAATATGGTCAGAAAGCTGTCAAAAACAACAAATTCCCCAGGAGCTACTATAGGTGTACACATCAAGGGTGCAATGTGAAGAAGCAAGTGCAACGGCTAACAAAAGACGAGGAAGTGGTGGTGACCACATACGAGGGAGTTCACAGCCATGCCATCGAGAAGACCAACGACAACTTTGAACACATTTTGAGTCAGATGCAAATATACACTCCCTTTTAA 558 0.4642 METYPVLFPCPDPSTYSVSTSATGDSHLLRGPSNNMEVSQINNPSGFLGLRHAAEGGDQSQRIRGCESLSRNNKDEQQGGSGKKKGEKKARKPRCAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEEVVVTTYEGVHSHAIEKTNDNFEHILSQMQIYTPF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0747 185 SUPERFAMILY WRKY DNA-binding domain 98 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g0747 185 SMART WRKY_cls 106 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g0747 185 MobiDBLite consensus disorder prediction 13 38 - -
Acco02g0747 185 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 43 169 IPR044810 GO:0003700
Acco02g0747 185 FunFam WRKY transcription factor 57 92 166 - -
Acco02g0747 185 ProSiteProfiles WRKY domain profile. 101 166 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g0747 185 Pfam WRKY DNA -binding domain 107 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g0747 185 Gene3D WRKY domain 93 159 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g0747 185 MobiDBLite consensus disorder prediction 58 94 - -
Acco02g0747 185 MobiDBLite consensus disorder prediction 12 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0747 Acco-ChrAcco02 5240189 5241219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0747 94 185 WRKY Transcription Factor Family AT5G13080 86.957 9.00e-57 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco02g0747 WRKY 2.8e-26 CL0274