Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0746 ATGGACTGGGACTGGAAAGAGTTGGCGTGGGATCCATCCGGGTCGGAGCTATCAAATGGAGAAGCTTCGGTGGATTTGAGTCTTGGAGAGATTTCCGATTTCATACAAAAATCGCCCTCAAATACACCTAAGGACTTACCGAGAGACTCGAAAACGGCAGAATCGCCGGGCGGTTCATCAAAGAGGAGCCGTACACTGAATGGATCGACTCAGAGTGTGTCGTGCTCGGTAGATGGGTGCGACTCCGACCTGAGTGATTGCAGAGAGTATCATCGGCGACACAGAGTGTGTGAGAAGCACTCCAAGACGCCTATTGTGTTGATAGGGGGAAAGCAGCAGCGATTCTGCCAGCAATGCAGCAGATTTCATTCTCTGGGGGAGTTCGATGAAGTTAAGAGGAGTTGCAGAAAACGTCTTGATGGACATAACAGGCGCAGAAGGAAGCCTCAGCCGCCTTCTCTTTTCATGGCTGCTGAGAAATTCCTGAGCGGCTACAAAGGACCCAGAATCCTTCATTTTGGTAGTCCTCAGATGTACGACCACCCGTTTGTGAGAAGTATGTGGCCTGCCACTACCAAAGCTGGAGCTGAACCGGTGATGATCAGTTATGACCAAAACAGTCTGCTAAGTTCCTTTGCTAATGGAGAGCATCAGCAGGACAAGCAACTCCCTCTCTTTGGGTTTAACAGCCCTAAAGAAGGCCATTGTAATGAGGCTGTGTCTGGAATTCCCACGAGACAAGCAACTTCTGGTGCCATTGGCCCATCAGCGAGTGCAAATGGTGGTCGGAAGCTCGCTTCTGATTTCAAACCTGGATCTTTTGATTCAAATTGTGCTCTCTATCTTCTGTCAACACTTCAGACACAAAGTCAAGAGTTAAGCTTGGTGCAGTCCACCGTGAACTGTCCGGTGCAATCATCTCCCTTAGAAAATTTGCATTTTGATGCTGGGGACAAGTGCTCATCATGCTCAGAAAGTCCACAAGAAAAGTCTACTAATCCGTTATTGGTTGTGGATACGGACAGGACTAACCTCCATTGCGACCGTATGATTCACATGAGGCCTGACGAAATTGTGGAAAATGGGGACTTGGCTACCTTACCATTTTTCTGGGAGTAG 1119 0.4853 MDWDWKELAWDPSGSELSNGEASVDLSLGEISDFIQKSPSNTPKDLPRDSKTAESPGGSSKRSRTLNGSTQSVSCSVDGCDSDLSDCREYHRRHRVCEKHSKTPIVLIGGKQQRFCQQCSRFHSLGEFDEVKRSCRKRLDGHNRRRRKPQPPSLFMAAEKFLSGYKGPRILHFGSPQMYDHPFVRSMWPATTKAGAEPVMISYDQNSLLSSFANGEHQQDKQLPLFGFNSPKEGHCNEAVSGIPTRQATSGAIGPSASANGGRKLASDFKPGSFDSNCALYLLSTLQTQSQELSLVQSTVNCPVQSSPLENLHFDAGDKCSSCSESPQEKSTNPLLVVDTDRTNLHCDRMIHMRPDEIVENGDLATLPFFWE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0746 372 MobiDBLite consensus disorder prediction 53 79 - -
Acco02g0746 372 MobiDBLite consensus disorder prediction 33 81 - -
Acco02g0746 372 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 29 295 IPR044817 GO:0003677
Acco02g0746 372 ProSiteProfiles Zinc finger SBP-type profile. 72 149 IPR004333 GO:0003677
Acco02g0746 372 FunFam Squamosa promoter-binding-like protein 14 66 136 - -
Acco02g0746 372 Gene3D - 66 136 IPR036893 GO:0003677|GO:0005634
Acco02g0746 372 Pfam SBP domain 75 148 IPR004333 GO:0003677
Acco02g0746 372 SUPERFAMILY SBT domain 73 154 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0746 Acco-ChrAcco02 5226968 5228725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0746 68 173 SBP-box Gene Family AT5G50670 66.038 5.16e-45 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco02g0746 SBP 1.3e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0746 02 5226968 5228725 Acco02g0746 02 5226968 5228725 ECH