Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0717 ATGATCACTAAGCTTCTTCTCCACCTGAGAGCTTTAGCCTTTTTGTTCTTCTGCCTCTTTGTCATTTCGTTTGGAGAAGAGCTTATCAGTTGCAACACAACATCCCCAGATGTTTCTGGCAACAGTTGCAGTAAAAATGAATCACAATGTGGAACATTTACAGTTTTCTTCACAAATTCATACTACTCATCTCTCTTCAACTTGAGCTTTTACTTGGGGCTCAATCCTTATGTGATTGCACATGCAAATGGGTTTTCTGCAGAAACAGAGTTTCTTCTTCATGACCAACCTTTACTAATACCAATAGACTGCAAATGCAAAGGTGGCTTCTTTGGCGCTGAAATTACCAAAACTACCATTAAAGGTGAGAGCTTTTATGGTATTGCTCATTCGCTTGAAGGCTTAACAACCTGCAAGGCTATTAGGGATAAGAATCCAGGTGTGTCACCTTGGGATCTCGATGATGACATCAGATTGCTGATTCCTCTGAGATGTGCATGTCCCTTATCACCTAAATTTTCTCCAGCGCCGAAGCTTCTGATTTCTTACCCTGTGCTAGAAGGCGATACAGTTCACAACTTGGCATCAAAGTTTAATACCACAGCTGAAGCAATAATCTCCGCAAATAACTTGTTCTCCAAAGATTTTAAACCTGAGAAGCTCACACCCTTTACCTCTGTTCTGATCCCACTCATTGGTAAGCCTGTTCTTGGTTCTCTGGCCAAACCCAAAGAACCCGGTTCAGTTAATCGATCAAGCAGCATTACAGTAATTAAACCATCACCACACAGGAAGCCCAAAACGTGGAAGGCAGAATTGTACATTGGCCTAGCTGGGGTCGCAGTTGGAATTTTGTTTGCTTTTGTAGCAGCTTTTGTTGTGGTTCGATTGAGGAACGAAAAGAAAGAGAAATCATCATCAGCCAAAAGAAACAATTTGGAGCTGCAACATCTTAATATAAGCGTAAGAACCACCAGCGAGAAGAAAGTTTCGTTCGAGGGGTCACAGTATGGGAAAATCATCGACACAATACCTTGTAAGATGCAGCTTGAGACATACACTATTGAAGATCTCATAAAAGCAACGGATGATTTCAGTTCAAGTAATCTTATTGAAGGATCTGTGTTTCATGGCCGTTTAGAAGGGAAGAACATGGCAATCAAACAAACAAACACAGAAACAGTATTGAAAATGGATATTGGGCTCTTCCACAACTCAATCCACCGTCACCCCAACATTCTCAGGATGCTAGGAACGTGTTTAACAGAAGGTCCAGAATCATATCTGGTTTTTGAGTACGCAGAAAACGGGTCCTTGAAAGACTGGCTTCATGGTGGTTTAGCCATAAAGAACGAGTTCATATCATCCTGTTATTGCTTTCTCACATGGAGTCAGAGGCTCAGAATCTGCCTCGACGTGGCCATGGCCCTGCAATATATGCACCACGTCATGAAGCCAAGTTATGTCCATAGAAACATAAAGAGCAGGAACATATTTCTGGAGGAAGAATTTGGTGCCAAGATTGGGAATTTTGGGGTGGCAAGTTGTGTTGAGAACGACACAGAGGATCCAAAGTTCCATTCAACCAACCCTGCTTCTTGGAATCTTGGTTATCTGGCACCAGAATATGTACACCAAGGTGTGATTTCTCCAAGTGCTGATATTTTTGCTTATGGCGTGGTTTTGCTGGAAATTTTGTCTGGTCAGACACCTATAAGCAGACCGAATGAGAAAGGAGAAGGAAGTGTTTGGCTCACTGATAAAATAAAGTCTGTTTTGGAGTCAGGAAATGAGGAAGAACTTAGAGGGTGGATGGACAAGGCATTGGGCGAGAATTATTCATTTGATGCAGCAGTAACAGTGGCGAATATTGCTAGGGCTTGCGTGGAGGAAGATTATAGTATGAGGCCAAGTGCAGGGGAAGTTGTGGAGAAACTAACCATATTGATTGAGGAACTTGCAGAAGATCAGATGTTGATGTCTGAAAGTTCTTGCCAGCCTCTGGTTAAAGCACTGGCAAAGCAGTGA 2028 0.4236 MITKLLLHLRALAFLFFCLFVISFGEELISCNTTSPDVSGNSCSKNESQCGTFTVFFTNSYYSSLFNLSFYLGLNPYVIAHANGFSAETEFLLHDQPLLIPIDCKCKGGFFGAEITKTTIKGESFYGIAHSLEGLTTCKAIRDKNPGVSPWDLDDDIRLLIPLRCACPLSPKFSPAPKLLISYPVLEGDTVHNLASKFNTTAEAIISANNLFSKDFKPEKLTPFTSVLIPLIGKPVLGSLAKPKEPGSVNRSSSITVIKPSPHRKPKTWKAELYIGLAGVAVGILFAFVAAFVVVRLRNEKKEKSSSAKRNNLELQHLNISVRTTSEKKVSFEGSQYGKIIDTIPCKMQLETYTIEDLIKATDDFSSSNLIEGSVFHGRLEGKNMAIKQTNTETVLKMDIGLFHNSIHRHPNILRMLGTCLTEGPESYLVFEYAENGSLKDWLHGGLAIKNEFISSCYCFLTWSQRLRICLDVAMALQYMHHVMKPSYVHRNIKSRNIFLEEEFGAKIGNFGVASCVENDTEDPKFHSTNPASWNLGYLAPEYVHQGVISPSADIFAYGVVLLEILSGQTPISRPNEKGEGSVWLTDKIKSVLESGNEEELRGWMDKALGENYSFDAAVTVANIARACVEEDYSMRPSAGEVVEKLTILIEELAEDQMLMSESSCQPLVKALAKQ 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0717 675 FunFam PTI1-like tyrosine-protein kinase 3 434 660 - -
Acco02g0717 675 Gene3D Transferase(Phosphotransferase) domain 1 434 666 - -
Acco02g0717 675 CDD LysM 181 215 IPR018392 -
Acco02g0717 675 ProSiteProfiles Protein kinase domain profile. 326 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0717 675 Pfam LysM domain 185 215 IPR018392 -
Acco02g0717 675 SUPERFAMILY Protein kinase-like (PK-like) 343 647 IPR011009 -
Acco02g0717 675 ProSiteProfiles LysM domain profile. 181 229 IPR018392 -
Acco02g0717 675 Pfam Protein tyrosine and serine/threonine kinase 398 646 IPR001245 GO:0004672|GO:0006468
Acco02g0717 675 Gene3D Phosphorylase Kinase; domain 1 341 433 - -
Acco02g0717 675 SMART LysM_2 182 230 IPR018392 -
Acco02g0717 675 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 23 652 - -
Acco02g0717 675 Gene3D LysM domain 170 235 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0717 Acco-ChrAcco02 5052693 5054720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0717 40 670 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 39.458 5.51e-149 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Acco02g0717 PK_Tyr_Ser-Thr 2.4e-31 CL0016