Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0690 ATGGTGAACGGAGAACAAAGACGCAGCCCGGACAACCAAAACAACCCATCAAGAGAAACAAGGTCATCGGAAAATGGCGACAACTTGGGCGGATTGTTCAGCCCCAGATTCAAATCTGCGGCTGCTATGGCCGGTTGGGATGAGGAGTCCCTGCTATTCGCCAGCCTCGTCGTCCAAGACACTCCCGATAGAGTTTTGAAGAATGATAAACACTTTGATCTTAACATCAAGACTCCGACCTCCAATTCAAGAAGGAAACGCAGAGCTCAGAGGAGTCCACTTCCAATCCCTGTGACTGTTCTTGACCTTGACCAAGATGAAACTCCCAGAAAGGATAATGTAAAGAAGATGAAAGAAAACAGAACTAGTGCTGACGAAGCGGGAAAGAATATTTTGACCCAGCAAAACTCTGGTTCTTCTTCTGGATCTGCTCTTCCCTGTATTGATAAACTCAGGGAGGAGCTTTCCTGCGCGATTTGTCTGGAGATATGCTTTGAACCAAGTACTACTCCTTGTGGGCACAGCTTCTGCAGAAAATGCCTTCGATCTGCAGCGGATAAATGTGGAAGAAAGTGCCCAAAGTGCAGACAACTGATTAGTAATGGACGATCTTGCAACGTGAACACAGTTCTTTGGAATACTATACAGCTCCTTTTTCCCAAGGAAGTGGAAGCAAGGAAAGCAGCAGGTGCCTTAAATATACGAGAAGCTCAGCAGCGCACGATTTCAGAAACAGCATTCTATGACAACCTAAGGATTCCAACATTTGAGGCACCAAGCAGAAGTACAAGAAGTCAGAGGAGAAGAGTAGTGATCACAACAACCCAAGATGAGGATGAAGATGCTGGATTGGCAAGAAGGTTGCAGAGAGAGGAAAATGGGGTGGTTCAGAATAATAATAATAATTCTAGGAACCTCACTCCATCTTCTTCAAGAGGGATGTCAAGAAGAAGGATAACGAGCCAAAACGAGGATGCTGCTTTGGCTCTGAGGTTGCAGAGGGAAGAGTTTATGCAGGCTTTCAGGGGAAGCCAAGCACGTTCGGAAACAAGTGGGTCAATGTCAATGTCTTCAGCCAGAGCAAATTTGAGCGCCATGGCTTCTAGAGCTATCAATCTTCGAATTAGAGACCGAAGAATATGA 1143 0.4576 MVNGEQRRSPDNQNNPSRETRSSENGDNLGGLFSPRFKSAAAMAGWDEESLLFASLVVQDTPDRVLKNDKHFDLNIKTPTSNSRRKRRAQRSPLPIPVTVLDLDQDETPRKDNVKKMKENRTSADEAGKNILTQQNSGSSSGSALPCIDKLREELSCAICLEICFEPSTTPCGHSFCRKCLRSAADKCGRKCPKCRQLISNGRSCNVNTVLWNTIQLLFPKEVEARKAAGALNIREAQQRTISETAFYDNLRIPTFEAPSRSTRSQRRRVVITTTQDEDEDAGLARRLQREENGVVQNNNNNSRNLTPSSSRGMSRRRITSQNEDAALALRLQREEFMQAFRGSQARSETSGSMSMSSARANLSAMASRAINLRIRDRRI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0690 380 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 226 IPR013083 -
Acco02g0690 380 MobiDBLite consensus disorder prediction 271 288 - -
Acco02g0690 380 Pfam Zinc finger, C3HC4 type (RING finger) 157 195 IPR018957 GO:0046872
Acco02g0690 380 PANTHER UNCHARACTERIZED 317 372 - -
Acco02g0690 380 MobiDBLite consensus disorder prediction 126 142 - -
Acco02g0690 380 MobiDBLite consensus disorder prediction 1 32 - -
Acco02g0690 380 MobiDBLite consensus disorder prediction 1 29 - -
Acco02g0690 380 ProSiteProfiles Zinc finger RING-type profile. 157 196 IPR001841 -
Acco02g0690 380 MobiDBLite consensus disorder prediction 74 142 - -
Acco02g0690 380 ProSitePatterns Zinc finger RING-type signature. 172 181 IPR017907 -
Acco02g0690 380 SMART ring_2 157 195 IPR001841 -
Acco02g0690 380 MobiDBLite consensus disorder prediction 259 319 - -
Acco02g0690 380 MobiDBLite consensus disorder prediction 104 125 - -
Acco02g0690 380 SUPERFAMILY RING/U-box 149 220 - -
Acco02g0690 380 MobiDBLite consensus disorder prediction 292 319 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0690 157 254 RAD5 or RAD16-like Gene Family AT5G43530 30.973 3.18e-06 47.4