Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0687 ATGGGAAGGCAGCCTTGTTGTGATAAGGTTGGTCTGAAACGAGGCCCTTGGACTATTGAGGAAGATCACAAGCTCATCAACTTCATCCTCAACAATGGCATCCACTGTTGGCGCATGGTTCCCAAGCTTGCTGGTCTGCTAAGATGTGGCAAGAGCTGCAGATTGAGGTGGATTAATTATCTGAGGCCTGACCTCAAGAGAGGTGGCTACACCGAGACGGAAGAGGATCAAATTATTCAGCTACATTCTCGTCTTGGTAACAGGTGGTCTAAGATTGCTGCACATTTTCCTGGGAGGACAGACAATGAGATCAAGAACCATTGGAACACGAGGATCAAGAAGAAGATGAAGCTCATGGGTCTGGACCCTGTGACCCACATGCCGCTTGATCAAATGCATAAGGAAATCACTGATAATAATAAGAAACAGAGAGACCAGTCAAGGCCCAGTTCTGAAGAAGATGCGGAGAGAACCATCAAGTCCTCCGACAGTAGTGTCTGCAGCACACAAGTTGTTTCATCAGTTTCAGAAGAACAAGGGAACAAGGTCTGTGATCTTCCCAACAAAAACGAATCGGGCTTGGAGTCATGGAAGTTGAACAAAGAGAAGAACACCAGTACTGCTAGCTCTTCATCTTTTTCTCTGGAAGATTCTAGCCACCTTTCCATGAGTGAATCTTCTTACCTGAAGGAAAACTCTTTAATGGAATGGGTTGACAGTATTAGTATGGAATCCATTCTCCAATGGGATGACTTCGATCCTCTGGATCAGGATCTTCTCTACTTTGCAGATAGATAA 798 0.4511 MGRQPCCDKVGLKRGPWTIEEDHKLINFILNNGIHCWRMVPKLAGLLRCGKSCRLRWINYLRPDLKRGGYTETEEDQIIQLHSRLGNRWSKIAAHFPGRTDNEIKNHWNTRIKKKMKLMGLDPVTHMPLDQMHKEITDNNKKQRDQSRPSSEEDAERTIKSSDSSVCSTQVVSSVSEEQGNKVCDLPNKNESGLESWKLNKEKNTSTASSSSFSLEDSSHLSMSESSYLKENSLMEWVDSISMESILQWDDFDPLDQDLLYFADR 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0687 265 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Acco02g0687 265 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco02g0687 265 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco02g0687 265 SMART sant 13 63 IPR001005 -
Acco02g0687 265 SMART sant 66 114 IPR001005 -
Acco02g0687 265 CDD SANT 16 61 IPR001005 -
Acco02g0687 265 MobiDBLite consensus disorder prediction 135 165 - -
Acco02g0687 265 MobiDBLite consensus disorder prediction 135 160 - -
Acco02g0687 265 Gene3D - 11 67 - -
Acco02g0687 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco02g0687 265 FunFam MYB transcription factor 11 67 - -
Acco02g0687 265 FunFam MYB transcription factor 68 129 - -
Acco02g0687 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco02g0687 265 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 214 - -
Acco02g0687 265 CDD SANT 70 110 IPR001005 -
Acco02g0687 265 Gene3D - 70 116 - -
Acco02g0687 265 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco02g0687 265 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0687 Acco-ChrAcco02 4814826 4815819 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0687 1 166 MYB Transcription Factor Family AT1G66230 65.663 9.91e-77 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g0687 Myb_DNA-binding 1.8e-11 CL0123