Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0647 ATGGAGAAACAGGTGGTGGAAAATCTATGGAAGGGAGAGCGGGAATCTCAGATTGAAGCAGCAATGGAGCTCACTAGATTAAGCAGCAAGCAGAGACACAAATTGGCTGAAAATGGAATAATGGTTCCTCTGATTTCTATGCTTCACTCTCAAGACCACGAAGCCATCGAAGCTTCTCTCTGTGCTCTGCTCTGTCTTGCCTTTGGCAGCGAACGAAACAAGATTCGGATCGTCAAGTCTGGAGCTTTATCAGTATTATTGAATCTCTTTCAATGCCAAAGCCAACCATTGGTAGAACTAACAGTGGCTGCAATGTTAACTCTTTCTTCTTGCAAAGCTAATAAGCTAGCGATAGCTTCATCTGGGGCAATCCAATTACTAATACAAATTCTCAATGGTCATTATGAAAATTGTACAAACGCACAATCCCAGCTAGACGCCATAGCCACACTCCACAACCTCTCGACCTGTCAAGAGATAACACCCGTGCTAGTCTCTTCTGGTATAACAATGTCCTTACTTGAACTGATTCGCAACTCAGGGAAATCAAGTGAGATAGCTGAGAAATCAATTGGGTTGCTGGAAAACATTGTGTATTCATCAGAGAGAGCATTAAGCCAGGCTGCTAGTTTAGGAGGAGCCATAAGAATAGTGGTTGAGACTATTGAAGAAGGTTCTATGATAGGGAAAGAACACGCTGTGGGAATATTGCTTCTGATATGTAAGAGTTGCAGAGAGAAATACAGAGGAATGATACTGAGAGAAGGAGTGATGCCTGGTTTGCTTCAGTTAAGTGTGGATGGGACACAGAGAGCTAAAGGGATGGCTAGAGAATTGTTGTTGCTTTTGAGGGATTGTTCTAATTATGGTTCTTCAACAAGTGGTAAGAATATGAAGATGAATCATGTGATTATAGAACAGATAATGCAGGAGATTGATGAGGAAGGTGAGGAATTGGCTGAGAGTACTTTGAGATTGGTGGAGGAGATGATTGCCAAGCTCCACACATGA 1011 0.4233 MEKQVVENLWKGERESQIEAAMELTRLSSKQRHKLAENGIMVPLISMLHSQDHEAIEASLCALLCLAFGSERNKIRIVKSGALSVLLNLFQCQSQPLVELTVAAMLTLSSCKANKLAIASSGAIQLLIQILNGHYENCTNAQSQLDAIATLHNLSTCQEITPVLVSSGITMSLLELIRNSGKSSEIAEKSIGLLENIVYSSERALSQAASLGGAIRIVVETIEEGSMIGKEHAVGILLLICKSCREKYRGMILREGVMPGLLQLSVDGTQRAKGMARELLLLLRDCSNYGSSTSGKNMKMNHVIIEQIMQEIDEEGEELAESTLRLVEEMIAKLHT 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0647 336 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 168 212 IPR000225 GO:0005515
Acco02g0647 336 FunFam U-box domain-containing protein 4 205 325 - -
Acco02g0647 336 Gene3D - 1 158 IPR011989 -
Acco02g0647 336 Gene3D - 161 331 IPR011989 -
Acco02g0647 336 PANTHER U BOX DOMAIN-CONTAINING 4 286 - -
Acco02g0647 336 SUPERFAMILY ARM repeat 4 326 IPR016024 -
Acco02g0647 336 SMART arm_5 157 199 IPR000225 GO:0005515
Acco02g0647 336 SMART arm_5 28 68 IPR000225 GO:0005515
Acco02g0647 336 SMART arm_5 70 110 IPR000225 GO:0005515
Acco02g0647 336 SMART arm_5 111 156 IPR000225 GO:0005515
Acco02g0647 336 Coils Coil 305 325 - -
Acco02g0647 336 FunFam U-box domain-containing protein 4 3 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0647 Acco-ChrAcco02 4551600 4553087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0647 4 285 U-box Gene Family AT3G54790 32.404 6.94e-27 109