Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0631 ATGCTCTTTGCCTCCCCAAAACACTTTGATGCCTCTCATCATCTAATGTCACTGTATTTGCGGCCTGTTCAAATCATAAACCTAACAAAGGTTGCAGTGAGACTCACAAATATAATGGCTTCTTCTTCGAGCTACTCAAATTCGCCATGTGCAGCGTGCAAGTTTCTGAGGAGGAAATGCATGCCAGACTGCATATTCGCGCCATATTTTCCACCAGAGGAACCTCAAAAGTTTGCAAATGTTCACAAAATATTCGGAGCCAGCAACGTAAGCAAGCTGCTAAATGAGGTGCAACCACATCAGAGAGAGGATGCTGTGAACTCTCTCGCTTATGAAGCAGAAGCGAGGATTAAGGATCCAGTGTATGGGTGTGTAGGGGCCATTTCTGTGCTCCAGAGGCAAGTCATTAGGCTTCAGAAAGAACTTGATGCTACTAATGCTGATCTCATTCGCTATACCTGCAACAACAACAACAATAATGATGACTTGCCTGGTCAAGGTTCAGCAAATCAAGGAGGTGGTGGTTCTAGTTCTACGTCTCTCGGTCAACAATCTCCTTCTGACTATTATTATCCTTCTCCTTGGAATAATTACTAA 597 0.4372 MLFASPKHFDASHHLMSLYLRPVQIINLTKVAVRLTNIMASSSSYSNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVQPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNADLIRYTCNNNNNNDDLPGQGSANQGGGGSSSTSLGQQSPSDYYYPSPWNNY 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0631 198 Coils Coil 128 148 - -
Acco02g0631 198 ProSiteProfiles LOB domain profile. 48 149 IPR004883 -
Acco02g0631 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 47 168 - -
Acco02g0631 198 MobiDBLite consensus disorder prediction 158 198 - -
Acco02g0631 198 Pfam Lateral organ boundaries (LOB) domain 49 145 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0631 Acco-ChrAcco02 4424979 4426711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0631 31 152 AS2 family AT3G27650 80.328 1.34e-70 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco02g0631 LOB 1.5e-42 No_clan