LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco02g0614	ATGGTTCGCCACCATGTCCACGAAGACAGAGCCACCGTGTTCCGGCCACTCTCCCTCGCCTCACCTCACATGCTTGCCTTCCATCTTGCATGGCTCAATCTCTTCTCCTGCTTCTTCTCCACCTTCTCCATCCCTCCCCTCCTCCCCGTCATCCGCCACCACCTCCACCTCACTCCCACTGACATTGGCAACGCCGGCATCGCCTCCTTCGTCGGCTCCATCTTCTCCCGCCTCCTCATGGGTCCCACCTGCGACCTCGTCGGGCCCCGCATAGCCTCCGGCACTCTCTCCCTCCTCACGGCACCTGTCATCCTCGCAACCGCTTTCGTGTCCACGCCTCAGTCCTTCATCGCCATTCGCTTCCTTGTCGGCTTCTCTCTCGCCAACTTCGTTTCCAACCAGTTCTGGATGACCTCCATGTTCGCCCCCTCCATAGTAGGCCTAGCAAACGGACTTGCCGCCGGGTGGGCCAACGTGGGTTCGGGTGTGACCCAACTAGTCATGCCTCTCGTCTACTCTCTCATCATCAACTTCAACGTGCCGTCTTCCATGGCTTGGAGGCTTGCGTTTGTTGTTCCTGCGATTTTCCAGGCAATCACAGGAATATTGGTCTTGGCTTTTGGGCAAGACCTACCTTCTGGGAGATACGTGCGTTCCAAGACACAGAAGACTGAAGGAGAGAACGTATTCAAAATTGTATTGGAGGGCTTGTCCAATTATAGAGGGTGGGTTTTGGGCCTGGTTTATGGGTTCTCTTTTGGGGTGGAATTAACTACAGACAACAACATAGCACAGTACTTTTATGATAGGTTTAACTTGAATATCGAAGTGGCGGGGAGTATTGCAGCGAGTTTTGGGGTGGCGAGTTTGTTCTCACGGCCAATGGGAGGAGTGATTTCTGATGGGTTGGGACGGAGGTTTGGGATGAGAGGTAGATTGTGGGGCCTGTGGGTGGTCCAAACGGTGGCCGGACTTCTTTGTATTTTACTTGGACGCCTCAACTCTCTCTGGAGTTCTATCCTTGTCATGTGTGCTTTCTCCGTATTTGTTCAAGCAGCTGGTGGCCTCACATTTGGTGTCGTCCCTTTCGTTTCCAAGAGATCGCTGGGAGTAATTTCAGGGATGACGGGGAGTGGAGGAACTATAGGGGCCGTGGTGACTCAAACGCTGTTGTTCTCAGGGGCCCACTTGTCAAAGCAAACAAGCATATCTCTAATGGGCATTATGATGGTATTGTGCACTGTGCCAGTGAGTTTTTTGTATTTCCCTCAATGGGGAGGTATGTTCTGTGGACCTTCATCAGATCCCGATTCACCTGAACACAATTATCACCTGCTTGATTCAGGATGA	1350	0.5274	MVRHHVHEDRATVFRPLSLASPHMLAFHLAWLNLFSCFFSTFSIPPLLPVIRHHLHLTPTDIGNAGIASFVGSIFSRLLMGPTCDLVGPRIASGTLSLLTAPVILATAFVSTPQSFIAIRFLVGFSLANFVSNQFWMTSMFAPSIVGLANGLAAGWANVGSGVTQLVMPLVYSLIINFNVPSSMAWRLAFVVPAIFQAITGILVLAFGQDLPSGRYVRSKTQKTEGENVFKIVLEGLSNYRGWVLGLVYGFSFGVELTTDNNIAQYFYDRFNLNIEVAGSIAASFGVASLFSRPMGGVISDGLGRRFGMRGRLWGLWVVQTVAGLLCILLGRLNSLWSSILVMCAFSVFVQAAGGLTFGVVPFVSKRSLGVISGMTGSGGTIGAVVTQTLLFSGAHLSKQTSISLMGIMMVLCTVPVSFLYFPQWGGMFCGPSSDPDSPEHNYHLLDSG	449

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco02g0614	449	FunFam	Nitrate transporter 2.1	227	427	-	-
	Acco02g0614	449	Pfam	Major Facilitator Superfamily	31	386	IPR011701	GO:0022857\|GO:0055085
	Acco02g0614	449	SUPERFAMILY	MFS general substrate transporter	18	421	IPR036259	-
	Acco02g0614	449	CDD	MFS_NRT2_like	27	419	IPR044772	GO:0015112
	Acco02g0614	449	ProSitePatterns	Sugar transport proteins signature 1.	296	311	IPR005829	GO:0016020\|GO:0022857\|GO:0055085
	Acco02g0614	449	Gene3D	MFS general substrate transporter like domains	228	425	IPR036259	-
	Acco02g0614	449	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	26	425	IPR020846	GO:0022857
	Acco02g0614	449	PANTHER	HIGH-AFFINITY NITRATE TRANSPORTER 2.3	7	441	IPR044772	GO:0015112
	Acco02g0614	449	Gene3D	MFS general substrate transporter like domains	22	217	IPR036259	-
	Acco02g0614	449	FunFam	Probable high-affinity nitrate transporter 2.4	19	214	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco02g0614	Acco-ChrAcco02	4294300	4295900	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco02g0614	8	432	Inorganic Solute Cotransporters	AT5G14570	64.009	0.0	568