Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0613 ATGGCTATTCCTGAATATGTATCTGTTATACTCATCATCTTCATTGAGGGATGTATCATTTTATTAATTCTTGGCTATATCTTTTGGCTAGTTCACTACTATCGTTCTCTACATGATGCGCTTGTGAAGCGCCTTCCTAGCTTCACCTACAACTCCTCCTCCTCCACTGTGGATGTGTGTGCCATCTGCTTGAATGAGTTCAAAGAAGGAGACATAGGACGTCTGCTCCCAAACTGCAACCACTTCTTTCACCATTGTTGCATCAATGAGTGGATCCAAAGAAGCAATACTACTTGCCCATTGTGCCGAGAGGTCATCAATCCAAGAACCACATCAATGCATGAAAATACAGAAGCATCTCTTGGAGGAGAAGGTCATTTGGAGAATTCGTCGAATATAAATCTTCGTTCGACAAATTGGTGCCCCAAACAAGTGGCAATAAAGATTCTTGAGGAGGATAAGAAATAG 468 0.4167 MAIPEYVSVILIIFIEGCIILLILGYIFWLVHYYRSLHDALVKRLPSFTYNSSSSTVDVCAICLNEFKEGDIGRLLPNCNHFFHHCCINEWIQRSNTTCPLCREVINPRTTSMHENTEASLGGEGHLENSSNINLRSTNWCPKQVAIKILEEDKK 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0613 155 ProSiteProfiles Zinc finger RING-type profile. 60 103 IPR001841 -
Acco02g0613 155 SMART ring_2 60 102 IPR001841 -
Acco02g0613 155 Pfam Ring finger domain 59 103 IPR001841 -
Acco02g0613 155 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 37 118 - -
Acco02g0613 155 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 31 109 IPR013083 -
Acco02g0613 155 SUPERFAMILY RING/U-box 41 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0613 Acco-ChrAcco02 4289476 4289943 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0613 35 107 Rapid Response to Elicitors AT3G16720 44.595 8.23e-17 73.6