Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0609 ATGAAACCTTCTTCATGCCTTCTCTTCATTCCCATCTCTCTCCTCTTTCTCTCCCTCCCTCCCTCCCTTCTCTCCGATCCTCGAATCTCCCAGGCCGGCCTCTTTTGCGGCACCTCCAAAGCCCCTCTCTCTTCCCATTACATCCCCATATTCGTCCAAGAAATGCAGTCCCTCTCTCAAACCATCACCTCTCAGAATTGGGCTTCTCACTCTCTCAACCTCTCTTCCCTCCCCATCTTCGGATTCGCTCAGTGCTTCCAAGACCTCTCCCACACCGATTGCCTCCTCTGCTACGCCGCCAGCCGCACCAAGCTCCCTCGCTGTCTCCCTTCTCTCTCCGCCCGCATCTACCTCGACGGCTGCTTCCTTCGATACGATAACTACAGTTTCTTCTCAGAAGCCATTGATCCCGTTCGGGACACTCTGAACTGTAGCTCCAGATATGGTGTTGGTGTGGCAGAGGATGAAGGCGGGGAGAGGCGGGAATTTGAGAACAACGTCGGCGAGGTGGTTGATAATGTGGTTAACGTTTCTGTGGGAGAGGGGTTGGGGTTTGGTGTGGGAGAGGTTGGGGGAGTTTATGCTTTGGCTCAGTGTTGGAAGACGCTGCGGAGCGATGAATGTGGAATTTGCTTGAGGAAAGCGGCGAGGGAAGTAAGAGGGTGCTTGCCTAACAGGGAAGGAAGGGCATTGAATGCTGGTTGCTATTTGAGGTACTCAACTCACAAGTTCTACAACCAAACAGGTCAAGAAGAAAAGGATCAAAAGAGGTCATTTAGGAAGGGAGCCATTACAGCAACAGTGCTATCTGTGGCTGCAGTTGCGATGCTGTTTCTCTCCGCCTTTTATGTAATCTTCTCAAGATTATCAAAGATGAATAAAGGGAGGAATCATGTTGGTCAGATTTCCATTTCCATAAACAAGTCAAGTTTGAATTTCAAATATGAGACTCTGGAGAAGGCCACAGATTATTTCAACCCTTCAAGAAAAATTGGGCAAGGAGGGGCTGGCTCTGTGTTCAAAGGGACCTTCCCAAACGGCAAAGTCGTGGCTGTCAAGAGATTAGTGTATAATACTAGGCAATGGGTTGACGAGTTCTTTAACGAAGTGAATTTGATTAGCGGAATTGATCACAAGAACCTCGTCAAACTCTTGGGTTGTAGCATTGAAGGCCCCGAGAGCCTCCTCGTCTACGAGTACCTACCCAACAAGAGCTTGGATCAATTCATTTTTGAAAAGAACAAAAGTCAGATTCTAAATTGGAAGCAGCGTTTTGATATAATACTCGGAATAGCAGAGGGGCTTGCATATCTTCATGCAGGATCTAAAGTAAGAATAATCCATAGAGACATTAAAAGTAGCAACATTCTTCTGGACGAGAATCTCACTCCTAAGATTGCCGACTTCGGCCTCGCCCGCTGTTTTGCCGCCGACAAAACGCATCTCAGCACCGGAATCGCCGGAACACTAGGATACATGGCACCTGAGTATCTTGTTCGAGGCCAACTAACAGAAAAAGCAGATGTTTATAGCTATGGAGTGCTTGTTCTGGAAATTTTATGTGGCAGGAGGAACAATGTCTTCAGAGAAGATTCTGGTTCCCTTCTACAAACAATTTGGAAACTCTATCGATCAAATCGATTGCATGAAGCTGTGGATCCATGGTTAGGAGATGATTTTCCAGCTGCAGAGTTATCAAGGGTGGTTCAAATAGGCCTGCTCTGCACACAAGCTTCTGCTTCCCTGAGGCCAACCATGGAAGAAGTTGTTGAGCTGCTAAGTAACTCAGATGTGGATGTTTGTGTACCAAATCAACCGCCTTTTTTGAGTACTGGCGCTGGGTTGCTAAACTCACAGAGCTCCATAAGGTCTTACAGCACAAACAGTTTTGTTTCAAATGCATTGAAGAAGATTGGGACGTCCGAAGTATCATCATCGGAGACCTTCAGCGCTCGCAGCTCCGAGGGACCATCAAGAAGTGAAGAACCGATAAACCAAGCTTGA 2004 0.4741 MKPSSCLLFIPISLLFLSLPPSLLSDPRISQAGLFCGTSKAPLSSHYIPIFVQEMQSLSQTITSQNWASHSLNLSSLPIFGFAQCFQDLSHTDCLLCYAASRTKLPRCLPSLSARIYLDGCFLRYDNYSFFSEAIDPVRDTLNCSSRYGVGVAEDEGGERREFENNVGEVVDNVVNVSVGEGLGFGVGEVGGVYALAQCWKTLRSDECGICLRKAAREVRGCLPNREGRALNAGCYLRYSTHKFYNQTGQEEKDQKRSFRKGAITATVLSVAAVAMLFLSAFYVIFSRLSKMNKGRNHVGQISISINKSSLNFKYETLEKATDYFNPSRKIGQGGAGSVFKGTFPNGKVVAVKRLVYNTRQWVDEFFNEVNLISGIDHKNLVKLLGCSIEGPESLLVYEYLPNKSLDQFIFEKNKSQILNWKQRFDIILGIAEGLAYLHAGSKVRIIHRDIKSSNILLDENLTPKIADFGLARCFAADKTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSYGVLVLEILCGRRNNVFREDSGSLLQTIWKLYRSNRLHEAVDPWLGDDFPAAELSRVVQIGLLCTQASASLRPTMEEVVELLSNSDVDVCVPNQPPFLSTGAGLLNSQSSIRSYSTNSFVSNALKKIGTSEVSSSETFSARSSEGPSRSEEPINQA 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0609 667 FunFam Cysteine-rich receptor-like protein kinase 2 401 601 - -
Acco02g0609 667 FunFam Cysteine-rich receptor-like protein kinase 3 148 244 - -
Acco02g0609 667 Pfam Salt stress response/antifungal 160 241 IPR002902 -
Acco02g0609 667 Pfam Salt stress response/antifungal 50 128 IPR002902 -
Acco02g0609 667 SMART serkin_6 325 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0609 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Acco02g0609 667 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 82 621 - -
Acco02g0609 667 Pfam Protein kinase domain 327 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0609 667 Gene3D Transferase(Phosphotransferase) domain 1 401 601 - -
Acco02g0609 667 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Acco02g0609 667 FunFam Cysteine-rich receptor-like protein kinase 2 29 130 - -
Acco02g0609 667 SUPERFAMILY Protein kinase-like (PK-like) 310 624 IPR011009 -
Acco02g0609 667 ProSiteProfiles Protein kinase domain profile. 325 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0609 667 CDD STKc_IRAK 331 593 - -
Acco02g0609 667 FunFam Cysteine-rich receptor-like protein kinase 2 291 400 - -
Acco02g0609 667 MobiDBLite consensus disorder prediction 640 667 - -
Acco02g0609 667 Gene3D Phosphorylase Kinase; domain 1 286 400 - -
Acco02g0609 667 Gene3D - 152 244 IPR038408 -
Acco02g0609 667 Gene3D - 32 130 IPR038408 -
Acco02g0609 667 ProSiteProfiles Gnk2-homologous domain profile. 145 244 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0609 Acco-ChrAcco02 4246599 4249205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0609 8 490 Receptor kinase-like Gene Family AT5G40380 56.327 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco02g0609 Pkinase 1.4e-45 CL0016