Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0603 ATGGATTTTGAGCCAAACTTCCATGAAAGCTTCTCTCTTCTTTCTGGGATTTTCCCAGAAATTCCCCCGAAATCTCAACCGCTATCACTTGCAATGCCACACATTCATGATCAACCTCCTCCTTCTTCCCACAATAATCCGCCAGTACTGTTTCCCACCGACCAAAATCTCCACCACCACCCTCACCATCAGCTGGATCTGAACGGGTCAGACCCGGGCCCGATCTTCCTCAAGCAGGCTCCATATCCTTACTCTCATCATGACGTCACTGTTCCTTTCGATTCTGCCTACCCAAACGAACCATTCAAAGTCGACGCCTTGCATGGCGGTCGGGCCTTCTGGGATTTCTCGCACAAGCTTTCTCTTCCATTCGACCCGTCCCTGACCCCACAGATGGGCCCACTATACCATCCAGCTTATGGATCATCACCATTGAAGCCTAAGCATCATCATCAGGACGAACTTCTTTTGTTCTTCCCTGAGAATAACAATGATCATAATAATCGCGGGCAAGACGAAGCCCGTGCTGATCATAACGATGTCAGGAAGATGAAGAAGCAGCAGATGCCCAAAGGTGGTATTCTCAAGAATACAAACATCATCAAAGGCCAGTGGACACCAGAAGAAGACAGCATGTTGGTGCAATTGGTGGAGAGGTTTGGGATGAAAAAATGGTCACAAGTCGCAAAGGCTTTGAATGGAAGGGTGGGAAAGCAGTGTAGAGAGAGGTGGCACAACCATCTGCGTCCGGACATTAGGAAGGAGGCATGGACGGAGGAAGAAGACATTATTCTGATCGAAGCTCACAAGGAAGTCGGAAATAAGTGGGCGGAAATCGCTCGCCGGCTTCCGGGAAGGACGGAAAACACCATCAAGAACCACTGGAACGCCACAAAGCGCCGCCAAAACGCCAAGAAACACAGAAACAGAGCATCCACATCGAGGCCTTCACTTCTTCAGGAATACATCAAGCAAGTCACCGCATGCCAAGGAACCTCAAGGCAGATTCAGATCAAACAAGAACAAGCCGACGAACCGGTGTACTATAGCAACAATCGCATGATGAACAACGTGAGAGTTCGCTACGAAAGCGCCTCGGATGATGACGACGACAGCAGCTCCGGCGATTGGGAGGTTGACGTGTACGAGGCGGCGGAGGAAGACGGCGAGGAAGAGGACGAGAAGGTGGCGCATAATAATGAGAATGATAATGGCGGAGAAGAGGAGGTGGCGGCGGAGATGAACGGGTTTGTGGGAGAGGATGGGATGAAGAAAGAGATGGATCTGATGGAGATGATTTGTGGTCCCATGAAGTACTGA 1320 0.5023 MDFEPNFHESFSLLSGIFPEIPPKSQPLSLAMPHIHDQPPPSSHNNPPVLFPTDQNLHHHPHHQLDLNGSDPGPIFLKQAPYPYSHHDVTVPFDSAYPNEPFKVDALHGGRAFWDFSHKLSLPFDPSLTPQMGPLYHPAYGSSPLKPKHHHQDELLLFFPENNNDHNNRGQDEARADHNDVRKMKKQQMPKGGILKNTNIIKGQWTPEEDSMLVQLVERFGMKKWSQVAKALNGRVGKQCRERWHNHLRPDIRKEAWTEEEDIILIEAHKEVGNKWAEIARRLPGRTENTIKNHWNATKRRQNAKKHRNRASTSRPSLLQEYIKQVTACQGTSRQIQIKQEQADEPVYYSNNRMMNNVRVRYESASDDDDDSSSGDWEVDVYEAAEEDGEEEDEKVAHNNENDNGGEEEVAAEMNGFVGEDGMKKEMDLMEMICGPMKY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0603 439 Gene3D - 201 253 - -
Acco02g0603 439 PANTHER MYB PROTEIN-RELATED 189 317 - -
Acco02g0603 439 Gene3D - 255 323 - -
Acco02g0603 439 MobiDBLite consensus disorder prediction 383 409 - -
Acco02g0603 439 SUPERFAMILY Homeodomain-like 199 295 IPR009057 -
Acco02g0603 439 Pfam Myb-like DNA-binding domain 205 263 - -
Acco02g0603 439 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 253 303 IPR017930 -
Acco02g0603 439 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 252 IPR017930 -
Acco02g0603 439 CDD SANT 256 299 IPR001005 -
Acco02g0603 439 SMART sant 253 301 IPR001005 -
Acco02g0603 439 SMART sant 201 250 IPR001005 -
Acco02g0603 439 CDD SANT 205 248 IPR001005 -
Acco02g0603 439 MobiDBLite consensus disorder prediction 32 63 - -
Acco02g0603 439 ProSiteProfiles Myb-like domain profile. 197 248 IPR001005 -
Acco02g0603 439 ProSiteProfiles Myb-like domain profile. 249 299 IPR001005 -
Acco02g0603 439 FunFam Transcriptional activator Myb isoform A 201 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0603 Acco-ChrAcco02 4207352 4209620 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0603 196 326 MYB Transcription Factor Family AT4G18770 68.702 2.91e-62 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g0603 Myb_DNA-bind_6 3.4e-19 CL0123