Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0560 ATGAAGGAGAAGAGCGAAAGCGGGGGTGGAGGGTATGTGAGAGCAGATCAGATAGATCTCAAGAGTTTGGACGAGCAGCTTCAGAGGCATCTGACAAGAGCATGGGCGATGGAGAAGAACCAGAAGAAGAAAGAAGAAGAAGAACAGAGTGGAGGCAGGTCTAACCCAACAAGGCAAGAATGGGAGATTGACCCTTCTAAGCTCATCGTCAAGAGCGTCATTGCTCGCGGCACTTTTGGCTCCGTTCACCGTGGCATTTATGATGGCCAAGATGTTGCAGTGAAGCTCCTTGACTGGGGAGAAGAGGGCCATCGGTCAGAGGCAGAAATAGCTTCCCTGAGAGCAGCTTTTACGCAAGAAGTTGCTGTTTGGCACAAGCTTGACCATCCTAATGTAACAAACTTCATTGGCGCAACAATGGGCTCATCAGATCTACACATACAAATGGAAAATGGTCAAATAGGAATGCCAAGTAATATTTGCTGTGTCGTTGTTGAGTATTGTCCTGGGGGTGCACTCAAGTCTTACCTCATTAAAAACAGGAGAAAGAAGCTGACATTCAAAGTGGTTGTCCAACTGGCACTTGATCTTGCAAGAGGGTTGAGCTATCTCCACTCACAGAAGATTGTCCACAGAGATGTCAAAACAGAAAACATGCTTTTAGACAAGACACGAACCTTGAAAATAGCTGACTTTGGAGTAGCCCGTATCGAGGCTTCTAATCCTCATGACATGACAGGCGAAACTGGAACTCTTGGTTACATGGCTCCTGAGGTTCTAAACGGTAATCCATATAATAGAAAGTGTGATGTGTATAGTTTTGGCATATGCTTATGGGAGATATACTGCTGCGATATGCCATATCCTGACCTTAGCTTTTCAGAGGTGACATCAGCTGTTGTCCGTCAGAATCTGAGGCCGGAGATACCTCGATGTTGCCCAAGCTCTCTGGCAAATGTAATGAAGAGATGCTGGGATGCGAATCCTGACAGGCGGCCGGAGATGGATGAGGTGGTGAAGATGTTGGAAGCTATAGACACTTCAAAGGGTGGAGGTATGATCCCTCATGATCAGCCTCAAGGCTGTCTTTGTTTCCGAAGATACAGGGGACCTTGA 1116 0.4677 MKEKSESGGGGYVRADQIDLKSLDEQLQRHLTRAWAMEKNQKKKEEEEQSGGRSNPTRQEWEIDPSKLIVKSVIARGTFGSVHRGIYDGQDVAVKLLDWGEEGHRSEAEIASLRAAFTQEVAVWHKLDHPNVTNFIGATMGSSDLHIQMENGQIGMPSNICCVVVEYCPGGALKSYLIKNRRKKLTFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDRRPEMDEVVKMLEAIDTSKGGGMIPHDQPQGCLCFRRYRGP 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0560 371 CDD STKc_MAP3K-like 74 342 - -
Acco02g0560 371 PRINTS Tyrosine kinase catalytic domain signature 165 178 IPR001245 GO:0004672|GO:0006468
Acco02g0560 371 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Acco02g0560 371 PRINTS Tyrosine kinase catalytic domain signature 269 291 IPR001245 GO:0004672|GO:0006468
Acco02g0560 371 PRINTS Tyrosine kinase catalytic domain signature 203 221 IPR001245 GO:0004672|GO:0006468
Acco02g0560 371 FunFam Serine/threonine-protein kinase HT1 168 353 - -
Acco02g0560 371 ProSiteProfiles Protein kinase domain profile. 68 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0560 371 Pfam Protein tyrosine and serine/threonine kinase 70 342 IPR001245 GO:0004672|GO:0006468
Acco02g0560 371 SMART serkin_6 68 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0560 371 PIRSF ILK 18 351 - -
Acco02g0560 371 MobiDBLite consensus disorder prediction 34 53 - -
Acco02g0560 371 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 55 345 - -
Acco02g0560 371 Gene3D Transferase(Phosphotransferase) domain 1 168 354 - -
Acco02g0560 371 SUPERFAMILY Protein kinase-like (PK-like) 51 342 IPR011009 -
Acco02g0560 371 FunFam Kinase suppressor of Ras 1 57 152 - -
Acco02g0560 371 Gene3D Phosphorylase Kinase; domain 1 57 151 - -
Acco02g0560 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Acco02g0560 371 MobiDBLite consensus disorder prediction 34 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0560 Acco-ChrAcco02 3901641 3904495 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0560 14 371 MAP Kinase Kinase Kinase AT3G22750 68.956 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Acco02g0560 PK_Tyr_Ser-Thr 4.8e-64 CL0016