Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0551 ATGCATCTTTCTTCCGAGTCTAGAAAAGCAATTCGGTTCAACTCATTTAGTTTTGTCCTTCCTGCTCCATCACCTGGAAAGCCATTCAAGGAACACTACAATTGCTGTTCTGAGGGCAATCAGAGGATGAGCGATATATGGCTTTTTACTGGAGCTATTATATTTATAGCAGTTTCATCCATAATAACTATAACTGCATACATCTTGCTTCGTAAACTTTCCAAATCAGCCAACCCCAGAAATAAAGCAACATCGTGGGAAGTTCTGTTGAACTTGAAGGATGATGCCTGTCCAAGAGTTCCTCTGAAGGAAGTCTACTCAGCCACAAACCATCCAAATGAAATGAATGTCATTGGTGAAGGAACTTTTGGGAAGGTTTATAAAGGCACAATGACAAATAATCAACATGTCGCAGTAAAACATTTCATTAACGACGATGGAAGCATGGAGACTTTTGTCAGAGAAATCACAAACTTATCACATGTTAGACATCCAAATCTCGTCGCTTTGTTGGGTTGTTGTGTTGAGGGAGATGAATGTTTCCTTGTCTATGAACTGTGCCCCAATGGGAGCTTGTCAGAGTGGCTATTTGGCAAGAACAAGGTTTTGTCCTGGATGCAGAGGCTTAATATTGCAATTGACACTGCAAAAGGTCTTTGGTTCCTTCATAAACACTCACAAGGCTGCACTGTTCACCGTGATGTCAAGCCAACAAACATTCTCCTGGGGCTGATGTTTGAAGCAAAGTTATCAGATTTTTGCCACTCTAAGGTTCTAGAAGTGGGTGAAACATATGTTAGCTCAGAAGTGAGAGGAACTTTTGGGTATGTTGATCCTGAGTACCAAAGCAACCGCCATGTAAATTCATCTGGGGATGTCTACAGCTTTGGCGTGGTACTTCTGCAGATCCTCTCTGGGAAGAAGGCTATAACTTTGAAACTCAAGAAACCCATGACTCTGAATAAAATGGCAAAAGCACTCACAAGGGCTAGCAGCATAACAGAACTTGTTGATCCTAAACTTGAAGGAGAGTACTCGGAAGAAGCATTTGATTTTACCCTTCATCTTGCTTTATCATGCACAGCCCTTAACCAACAACGTCCATCCATGGAGCAGGTTGTCAAAAAATTGGAGGCCCTACTAATTTCAATGAAGAAGGTTTCTGCAACAGACACTTCAGGGTACTATCCTTCAATTCTATGA 1203 0.4148 MHLSSESRKAIRFNSFSFVLPAPSPGKPFKEHYNCCSEGNQRMSDIWLFTGAIIFIAVSSIITITAYILLRKLSKSANPRNKATSWEVLLNLKDDACPRVPLKEVYSATNHPNEMNVIGEGTFGKVYKGTMTNNQHVAVKHFINDDGSMETFVREITNLSHVRHPNLVALLGCCVEGDECFLVYELCPNGSLSEWLFGKNKVLSWMQRLNIAIDTAKGLWFLHKHSQGCTVHRDVKPTNILLGLMFEAKLSDFCHSKVLEVGETYVSSEVRGTFGYVDPEYQSNRHVNSSGDVYSFGVVLLQILSGKKAITLKLKKPMTLNKMAKALTRASSITELVDPKLEGEYSEEAFDFTLHLALSCTALNQQRPSMEQVVKKLEALLISMKKVSATDTSGYYPSIL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0551 400 Gene3D Transferase(Phosphotransferase) domain 1 187 394 - -
Acco02g0551 400 Pfam Protein kinase domain 115 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0551 400 ProSitePatterns Protein kinases ATP-binding region signature. 118 140 IPR017441 GO:0005524
Acco02g0551 400 SUPERFAMILY Protein kinase-like (PK-like) 96 378 IPR011009 -
Acco02g0551 400 ProSiteProfiles Protein kinase domain profile. 112 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0551 400 FunFam probable receptor-like protein kinase At5g59700 187 393 - -
Acco02g0551 400 SMART serkin_6 112 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco02g0551 400 Gene3D Phosphorylase Kinase; domain 1 73 186 - -
Acco02g0551 400 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 30 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0551 Acco-ChrAcco02 3862988 3865289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0551 102 379 Receptor kinase-like Gene Family AT1G07650 42.657 3.50e-61 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-2 Acco02g0551 Pkinase 2e-42 CL0016