Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0550 ATGGCTACTCGCATTCTGCATTCGGTCGCTTCTTCTGCCTCTGCTTCCAGACGTTGCTTGGGTCTTCGTCGTGGGTGGTTGAGAGGTATCAGTGGATTACACGAATCTGCTGCTGCTGCTGCTGAGGAGCCTGTTACCCCACCTGTTCAAGTAGATCACACTCAGCTTCTCATTGATGGACAATTTGTTGATGCTGCTTCTGGAAAAACTTTCCCAACCTTCGATCCTAGGACAGGAGATGCAATTGCCCATGTTGCTGAAGGTGACGGCCAAGATGTGGATCGTGCTGTCTCTGCTGCCAGGAGGGCCTTTGATGAAGGACCATGGCCAAAGATGACAGCTTACGAAAGGTCACGCATAATTCTGCGTTTTGCTGATTTACTGGAAAAACACAATGATGAAGTTGCAGCTCTTGAAACATGGAACAATGGAAAGCCTTATGAGCAGGCTGCGAATGTTGAAGTGCCTATGGTGACACGTATATTTCGATATTATGCTGGCTGGGCAGATAAAATTCATGGCCTCACAGTTCCATCTGATGGATCCCACCATGTCCAAACCTTGCATGAGCCCATTGGGGTAGCTGGCCAGATTATTCCTTGGAATTTCCCTCTTCTTATATATTCATGGAAAGTCGGGCCTGCTTTAGCCTGTGGTAATACCGTTGTTCTCAAAACTGCAGAGCAGACACCTCTCTCTGCCCTATTTGTCTCAAAGCTATTTTATGAGGCTGGACTTCCTCCTGGTGTTCTAAATATTATATCTGGCTATGGTCCCACCGCTGGTGCAGCTCTATGCAGCCACATGGGTGTTGACAAGCTTGCTTTCACAGGATCCAGTAGCACTGGCAAGATCGTAATGGGACTATCTGCGCAAAGTAATTTGAAACCAGTGACTCTGGAGCTGGGTGGAAAGTCTCCCTTCATTGTGTGCAAGGATGCTAACATTGATGAGGCTGTTGAGACTGCACATTCTGCTTTATTCTTTAATCAGGGTCAATGTTGTTGCGCCGGTTCTCGTACATTTGTACATGAAAGCATATATGATGAGTTTGTGGAAAAAGCAAAAGCCCGTGCTCTCAAACGTAGTGTTGGAGATCCTTTTAAAAGAGGGATTGAGCAAGGTCCTCAGATTGATTCCACACAATTCGAGAAGATCCTCAAGTACATTAGATCAGGCATTGATAGTGGAGCTACTCTTGAATCTGGTGGTCAACGAATTGGCTCAAAAGGTTACTACATCCAGCCTACTGTTTTCTCAAACGTTCAGGACAACATGCTGATAGCAAAAGATGAAATCTTTGGACCAGTGCAGACTATCTTGAAATTCAAGGATCTTGAGGAGGTAATAAAAAGAGCAAATGCAACATCCTATGGGCTGGCTGCTGGAGTTTTTACTCAGAATTTGGACACTGCCAACACATTGATGCGCGCATTGCGAGTTGGAACAGTCTGGATAAACTGCTATGATGTGTTTGATGCTGCAATACCTTTTGGTGGGTATAAGATGAGTGGGCAAGGCAGAGTAAGGGGAATATATAGCCTTAGCAATTACCTGCAAATTAAGGCTGCTGTTACTTCTTTGAAAAATCCAGCTTGGTTGTAG 1605 0.4536 MATRILHSVASSASASRRCLGLRRGWLRGISGLHESAAAAAEEPVTPPVQVDHTQLLIDGQFVDAASGKTFPTFDPRTGDAIAHVAEGDGQDVDRAVSAARRAFDEGPWPKMTAYERSRIILRFADLLEKHNDEVAALETWNNGKPYEQAANVEVPMVTRIFRYYAGWADKIHGLTVPSDGSHHVQTLHEPIGVAGQIIPWNFPLLIYSWKVGPALACGNTVVLKTAEQTPLSALFVSKLFYEAGLPPGVLNIISGYGPTAGAALCSHMGVDKLAFTGSSSTGKIVMGLSAQSNLKPVTLELGGKSPFIVCKDANIDEAVETAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRSVGDPFKRGIEQGPQIDSTQFEKILKYIRSGIDSGATLESGGQRIGSKGYYIQPTVFSNVQDNMLIAKDEIFGPVQTILKFKDLEEVIKRANATSYGLAAGVFTQNLDTANTLMRALRVGTVWINCYDVFDAAIPFGGYKMSGQGRVRGIYSLSNYLQIKAAVTSLKNPAWL 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0550 534 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 300 307 IPR029510 GO:0016491
Acco02g0550 534 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 328 339 IPR016160 GO:0016491
Acco02g0550 534 FunFam Mitochondrial aldehyde dehydrogenase 2 306 495 - -
Acco02g0550 534 CDD ALDH_F2BC 51 526 - -
Acco02g0550 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 304 493 IPR016163 GO:0016620
Acco02g0550 534 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 58 522 IPR016162 GO:0016491
Acco02g0550 534 Pfam Aldehyde dehydrogenase family 62 523 IPR015590 GO:0016491
Acco02g0550 534 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 38 523 - -
Acco02g0550 534 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 58 328 - -
Acco02g0550 534 SUPERFAMILY ALDH-like 51 527 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0550 Acco-ChrAcco02 3859473 3862654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0550 1 534 Aldehyde Dehydrogenase Gene Family AT3G48000 73.606 0.0 848