Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0537 ATGCAAACGTTGTCGTATCGGGGTAAAAACGACGCCGTGGGCATTGTTTCCGTCAGGCATTACCTGGGGCAACTGGCAAAATACTTTTGGGATAGATTCAGTATTCAAGGGACATGGAGGGCTATGCATGTGTCGGGAGGTGAGGAGTGGAAACAGAGGCGGCACATGTGGCCAGTCCCTGCCACCGCGACGACTGTAGCTCCCGCAGCCGATTCTTCATCATCCGAATTCATATGCAAGGATGGACGCGAGATTCGTGTTGGTGATTGTGCACTTTTCAAGCCACCCCAAGATTCCCCACCTTTTATAGGAATAATTCGTAAATTAACATTGAAGAAGAAAGAAGAAAGTCCGAGTTTAGAAGTGAATTGGCTTTACCGACCTGCTGATCTGAAGCTTGCAAAAGGGGTCCAATTGGAAGCTGCGCCAAACGAGGTCTTTTACTCCTTTCACAAGGATGAAACACCTGCTGCATCATTACTCCATCCGTGTAAAGTTGCATTCCTTCGTAAAGGTGTTGAACTTCCTTCAGGGATATCCGCATTTGTCTGTAGACGAGTGTATGACATTGAGAGTGAGCGTTTATGGTGGCTAACTGATAAAGACTACATTAATGAACGACAAGAAGAAGTTGACCAGCTATTAGATAAAACAAGACTAGAAATGCATGGGGCAGTGCAGTCAGGAGGCCGTTCTCCAAAACCCTTGAATGGTCCGACATCAACACCTTCACTGAAATCTGGTTCTGATAGTGTTCAAAATAGTTCTTCTTTTGGTTCACAGGGTAAGGGAAAGAAGAGGGAACGGGGTGATCAGGGATCTGATTCATCTAAAAGGGAACGGTTATTCAAAACAGAAGATGGTGATACTGGTCAGCATAGGCCAGAAAACATGTTAAAGTCTGAGATTGCTAAAATTACTGAGAACGGTGGTCTTGTCGACTTTGAGGGAGTTGAAAGACTGGTACAGCTTATGCAACCTGACATTGCTGATAAAAAAATGGATTTGGCTGGGCGAATAATACTTGCTGATGTAATTGCAGTCACAGATCGGTTTGATTGTCTTGGAAGGTTTGTACAGCTTAGGGGCCTACCTGTATTGGATGAATGGCTCCAAGAGGTCCATAAAGGGAAAATTGGTGATGGTAATACGCCTAAAGAAAGTGACAAGTCTGTTGAAGAATTACTGTTGGCTCTACTTCGTGCATTGGATAAGCTCCCAGTGAACCTTCATGCCTTACAGACATGTAATGTTGGAAAGTCTGTGAATCACTTACGTACTCACAAGAATTCTGAAATTCAAAAGAAAGCTAGGAGCTTAGTTGACACTTGGAAGAAACGTGTTGAGGCTGAAATGAATATTAGTGACTCAAAATCTGGGTCTGGCCGGGGTGTTTCTTGGCCAGCTAAGCCTGCATCTTCTGAGGTTTCTCATGTTGGAAGTAGGAAAACAGGTGGATCTGCTGACGTAGCTGCAAAGAGCTCTTCAATGCTACCGTCTGCTTCCAAAAACTCTCAGGCTAAGATTAGCTCAGGAGAATCACTTCCCAAGCTTTCCCCATCTTCCTCTTCAACTAAAGCTGGTACCACCTCAGTGGCCTGTAATTCAAAGGAGCAAAACTTTAAAGCTGGAGCGGGAACAGCAGATTTACCGTTGACACCTATTAAGGAGGAAAGGAGCAGCAGTTCTAGTCAGTCTCAAAACAACAGCTTATCTTGTTCTAGTGAACAAGCAAAAACTATTGGTTCTTGTAGGGAAGATGCAAGGAGCTCCACTGCTGTGTCAGTGAGCGTGGGCAAAATTCTTGGCAGTGCATCTCGGTCCCGGAAATCAAGCAATGGTCTGCATGGGTCTGGTTTAACTGCAGTTCAGAAGGAGCCCCATTTTGGAAAAAACTTGAGTAGAAACTCAACTTCAGAGAAGGTTTCACTGAATCAGCCAGCCCATGAAAAATCACCCGACGTGCTTCTTCCTGATCATGGAAGCAATCAGAGACTGATTGTTAGGTTGCCAAACACTGACCAAAGTCCTGCCCGGGGAGCTGGTGGGGGCTGTGAAGATCCTGCAATTCTGCCTGGCAAAGCCTCACCTCCTGGAGATAAGCATGAGAATGTGGATAGAAGAGTGAAATTCAAAACTGATAGTTCTCAGATTAATAATATTTTGAATATGGCCACTGATGTTTGCAATGCTAGCGAAGCTGCGGCTGATTGTGAGGAAGGTAATGACTCACCAACTGGTGAAGGATGCAGGGCCACTGAAGATGGTGATAAACTCACAGAAACATCAAAACCAATCAGCTCATCCGGATTTCTGTCCAGATCAGGGCAGAATTATGATGCTTCCTTGAGCTCCATAAATGCATTAATTGAAAGTTGTGTGAAATTTTCGGAAGCAAATCCCTCTGTGTCCCCTGTTGATGATGCTGGGATGAACCTACTTGCTACTGTAGCTGCTGGAGAAATATCTAGGTCAGAAAATGTGACGCCAGCGGTTTCTCCTGGGAGGAAGTCTCCTGCAGCAGATGAATCATGCTCAGGCAATAATGATGGTAAGTTACAACATTCAGGTGAAGCAGTTGCTGGCACTCTTGAACATTTGAAGGGTGGTGCTACTGAAGATCAGGTAAACACTGTTGATCCAGTGCAGCTCAAGAATGATGCAAAGCATACAGTAGGATCAAGATCATGTGATCTGTCTGGAGATGGTGAATCTACACAATCTGGTTGCAAAGAGAAAACTGTTGATGGTACTGATTTGTTGCATAATGTGGAAGGTCCATTCTTAGGGCCTGAAGCAAAAGAGGAAGCTTCTGAAACAGTATTGCCTGCTAAAAAGGAGAATGTTGCGGAGCCTGATGGGGTTAGTCCTCTTCATGAGCAGAGGAAATTGGAAACTCGTTGGGGTAAGAGCAGCAATAATTCAGACTCTAAAATAAAAACATGTACTTCTGTTGATGAGGACCAGAAGGTTGATCATGTTAATGAGGGGAAGATGGAGAATGAAGTTTCAGTTTGTGAAGGGTCTCATGTAAGTCTAAAAATCGAGGAGGAAGTGTGTGAAAAATCACCTGAATCATCTACTGGTTTGGTTAATGAGAACCAGATTAGTGGGGAGAAAGTGGCTGGTAGTATCATCTCGGTGCACAAGCATGAGTTTAGTGATGGCAGAAATGAGAATGTTGTGGTACCACCTTCTGCTTCTAGTTATCCTTCGATGGAATCTAAGGCTGTGAGTACTGTTGACGTGAAACCATGTGAGGTGGAGAATAGTAAGGAAAGACAAAGGGATATGGACTCAACTGGGCCTGCTGTTAACAACCAATGTACTGCAGAGAATTTGGATAGAAAAGAGGTGCTCAGTCTCAGCATTGATTCATCTGTACAGTCTGAGTCTCCAAATAATTCTGTGCAAGAGAATGAAGTGCTAAAAAACCCTTCTGGGTTTAATATGGACAGAGTTCCGTCTGATGGGGCAGCAGAACAACATGCCTCTGGTTCTCATCATCTGGACTTCGATTTAAACGAGGGATTTCCTGTTGAAGATGTGAATCAAGGGGATGTGAGACTGGAAGAACCTAATACATCATCTGCAGTCCATGTTCCATGCCCATTGCCTTTTCCTATTTCTTCCATGTCTGGGGGCTTCCATGCTTCGATTACTGTGGCTTCTGCTGCCAAAGGGCATGTTATTCCACCAGAGAACCCTTTGCGGAGTAGGGGGGAGCTTAGGTGGAAAGGGTCAGCTGCTACCAGTGCATTCCGACCAGCTGAGCCTAGGAAAAACACAGAGCAGCTATCAAATACTAGTGATAGTGTTACCAAGCAAGGTCGTGCTCCTCTAGATTTTGATTTGAATGTGCCTGATCAAAGAAGTTTTGAGGATGTGGTTACCCATGTCTCTTCAGAGACTTGCTTAGAATCCTTGCCTCGTGACCGTGCGACTGCAGGACTTGATCTTGATTTAAACCGAGTTGACGAGACTCCTGATCCTGGATGTTTTCCTGTGAGCAAACTGGATATTCCTTCTTTACCAACTAAACCTTCATTGTCTGGTGGATTATCCAGCTCTGGAAATGTATCAAGAGACTTTGATTTAAATAATGGGCCAGGCCTTGATGAAGTTGGCACTGAAGTCCCAGCACGTAGCCAGCAGATAAAAAGTACTGTTCCAATGCCTTCTACTGTTCACGGTGTAAGAACAAATAGTGCTGATTTTGGGAATTATTCATCATGGTTTCCCTCAGGGACCTCCTATCCTGCAATCAATGTCCCACCACTTCTGCCTGGTAGAGGAGAACAGAGCTTTGTTGCTGGTCCTGGAGCACAGCGAATGTTGGGTCCTCCAGGTAGCACTTCTTTTGGTCCTGAGATCTATAGAGGTGCAGTTCTTTCATCCTCTCCAGCTGTTGCTTATCCTTCCAGTACACCATTTCAGTACCCAGGATTTCCTTTTGAAACCAATTTTCCTTTGTCTTCAAATTCCTTTTCTGGCTGTTCAACACCCTTCATGGACTCCTCAACAGCAGGTGGCCTTTGCTTTCCTACCATGCCCTCACAGCTAGTTGGGGCTGGTGGTGTTGTCTCGTCCAGTTTTCCCCGTCCTTATGTTATGAGTCTTCCAGGTGGTACAAGTAACGTGATACCTGAAAGTAGAAAATGGGGAGCTCAAAGTCTGGATCTTAATTCAGGCCCTGGTGGTTCAGATATAGAACGGAGAGATGATAGATTGCCTTCAGGGTTGAAGCAACCTCCTGTCTCAAGTTCCCAAGCCTTGATGGAGGAGCAGATGAAGATGTTTCACGTGGCAGGAGGTGTATTGAAGAGAAAGGAACCTGATGGTGGAGGTTGTGAGCCCCCTTCTTTTGTTCATATTGTCAGAAATATTGAAGACGACACAAGTGTGAAGCCAGCCTCGAATGAGACTGCAGCTGTGCCTCGTCATTTCCGACAGACTGAGGGATCTGGGCCTCTGATGCAGCTGTTTTGA 4989 0.4508 MQTLSYRGKNDAVGIVSVRHYLGQLAKYFWDRFSIQGTWRAMHVSGGEEWKQRRHMWPVPATATTVAPAADSSSSEFICKDGREIRVGDCALFKPPQDSPPFIGIIRKLTLKKKEESPSLEVNWLYRPADLKLAKGVQLEAAPNEVFYSFHKDETPAASLLHPCKVAFLRKGVELPSGISAFVCRRVYDIESERLWWLTDKDYINERQEEVDQLLDKTRLEMHGAVQSGGRSPKPLNGPTSTPSLKSGSDSVQNSSSFGSQGKGKKRERGDQGSDSSKRERLFKTEDGDTGQHRPENMLKSEIAKITENGGLVDFEGVERLVQLMQPDIADKKMDLAGRIILADVIAVTDRFDCLGRFVQLRGLPVLDEWLQEVHKGKIGDGNTPKESDKSVEELLLALLRALDKLPVNLHALQTCNVGKSVNHLRTHKNSEIQKKARSLVDTWKKRVEAEMNISDSKSGSGRGVSWPAKPASSEVSHVGSRKTGGSADVAAKSSSMLPSASKNSQAKISSGESLPKLSPSSSSTKAGTTSVACNSKEQNFKAGAGTADLPLTPIKEERSSSSSQSQNNSLSCSSEQAKTIGSCREDARSSTAVSVSVGKILGSASRSRKSSNGLHGSGLTAVQKEPHFGKNLSRNSTSEKVSLNQPAHEKSPDVLLPDHGSNQRLIVRLPNTDQSPARGAGGGCEDPAILPGKASPPGDKHENVDRRVKFKTDSSQINNILNMATDVCNASEAAADCEEGNDSPTGEGCRATEDGDKLTETSKPISSSGFLSRSGQNYDASLSSINALIESCVKFSEANPSVSPVDDAGMNLLATVAAGEISRSENVTPAVSPGRKSPAADESCSGNNDGKLQHSGEAVAGTLEHLKGGATEDQVNTVDPVQLKNDAKHTVGSRSCDLSGDGESTQSGCKEKTVDGTDLLHNVEGPFLGPEAKEEASETVLPAKKENVAEPDGVSPLHEQRKLETRWGKSSNNSDSKIKTCTSVDEDQKVDHVNEGKMENEVSVCEGSHVSLKIEEEVCEKSPESSTGLVNENQISGEKVAGSIISVHKHEFSDGRNENVVVPPSASSYPSMESKAVSTVDVKPCEVENSKERQRDMDSTGPAVNNQCTAENLDRKEVLSLSIDSSVQSESPNNSVQENEVLKNPSGFNMDRVPSDGAAEQHASGSHHLDFDLNEGFPVEDVNQGDVRLEEPNTSSAVHVPCPLPFPISSMSGGFHASITVASAAKGHVIPPENPLRSRGELRWKGSAATSAFRPAEPRKNTEQLSNTSDSVTKQGRAPLDFDLNVPDQRSFEDVVTHVSSETCLESLPRDRATAGLDLDLNRVDETPDPGCFPVSKLDIPSLPTKPSLSGGLSSSGNVSRDFDLNNGPGLDEVGTEVPARSQQIKSTVPMPSTVHGVRTNSADFGNYSSWFPSGTSYPAINVPPLLPGRGEQSFVAGPGAQRMLGPPGSTSFGPEIYRGAVLSSSPAVAYPSSTPFQYPGFPFETNFPLSSNSFSGCSTPFMDSSTAGGLCFPTMPSQLVGAGGVVSSSFPRPYVMSLPGGTSNVIPESRKWGAQSLDLNSGPGGSDIERRDDRLPSGLKQPPVSSSQALMEEQMKMFHVAGGVLKRKEPDGGGCEPPSFVHIVRNIEDDTSVKPASNETAAVPRHFRQTEGSGPLMQLF 1662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0537 1662 Pfam TFIIS helical bundle-like domain 399 448 IPR017923 -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 605 659 - -
Acco02g0537 1662 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 316 452 IPR035441 -
Acco02g0537 1662 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 353 461 IPR035441 -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 233 261 - -
Acco02g0537 1662 SMART BAH_4 83 199 IPR001025 GO:0003682
Acco02g0537 1662 MobiDBLite consensus disorder prediction 1556 1588 - -
Acco02g0537 1662 ProSiteProfiles BAH domain profile. 83 199 IPR001025 GO:0003682
Acco02g0537 1662 Pfam BAH domain 85 193 IPR001025 GO:0003682
Acco02g0537 1662 MobiDBLite consensus disorder prediction 672 704 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 892 911 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 1247 1286 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 1057 1112 - -
Acco02g0537 1662 CDD TFIIS_I 404 449 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 1061 1076 - -
Acco02g0537 1662 SMART TFS2_5 371 450 IPR003617 GO:0005634
Acco02g0537 1662 MobiDBLite consensus disorder prediction 223 297 - -
Acco02g0537 1662 Gene3D - 67 310 IPR043151 -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 737 775 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 1124 1145 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 826 852 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 1124 1170 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 1261 1276 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 630 646 - -
Acco02g0537 1662 ProSiteProfiles TFIIS N-terminal domain profile. 365 451 IPR017923 -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 262 297 - -
Acco02g0537 1662 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 42 1615 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 488 531 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 452 531 - -
Acco02g0537 1662 MobiDBLite consensus disorder prediction 605 619 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0537 Acco-ChrAcco02 3789053 3796148 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Acco02g0537 BAH 1.2e-11 No_clan