Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0524 ATGGCGGGCGGAACTGAAGCTTTCCCTGATTTAGGAAGACACTGTCAACACGACGATTGCTATCTCCTCGATTTCCTCCCTTTCACCTGCGCCGGTTGCCACCAGATATTCTGTCTCGAACATCGATCTTACAGGTCCCACAATTGCCCCAACTCCGATCATAAAAGCCGGAAGGTCGTCGTCTGCGAGGTATGTTCCATGGCTATCGAGACCACCGGTCTCGTCGGAGAAGAAGAGAAGGCAGTCTTAGAGAGGCACGAGAAGTCTGGAGATTGTGACCCTAGGGAGAAAAAGAAACCCACTTGTCCTGTTAAGAGATGCAAGGCGATCTTGACGTTTTCTAATACAAGCAAGTGTAAAACGTGTGACTTGAAGGTGTGCCTCAAGCACCGTTTTCCGGCCGACCACGCCTGTGACAGGGCTGCTGCGGCTAAAGCTGTTAGAAAACTTTTGAATTTGGATTTGAATTCTCCGCCTCCAATTGCTTTGTCACTGAGGAATGGAAAGGACTGCCCAAAGATTCCTACTTCTCGTCCTGCCGCTACTCGATCAGTCAAAGCCTGCTGA 567 0.5009 MAGGTEAFPDLGRHCQHDDCYLLDFLPFTCAGCHQIFCLEHRSYRSHNCPNSDHKSRKVVVCEVCSMAIETTGLVGEEEKAVLERHEKSGDCDPREKKKPTCPVKRCKAILTFSNTSKCKTCDLKVCLKHRFPADHACDRAAAAKAVRKLLNLDLNSPPPIALSLRNGKDCPKIPTSRPAATRSVKAC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0524 188 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 146 - -
Acco02g0524 188 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
Acco02g0524 188 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Acco02g0524 188 Pfam AN1-like Zinc finger 102 141 IPR000058 GO:0008270
Acco02g0524 188 Gene3D - 2 67 IPR035896 -
Acco02g0524 188 Gene3D - 78 153 IPR035896 -
Acco02g0524 188 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Acco02g0524 188 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Acco02g0524 188 SUPERFAMILY AN1-like Zinc finger 68 148 IPR035896 -
Acco02g0524 188 SUPERFAMILY AN1-like Zinc finger 5 58 IPR035896 -
Acco02g0524 188 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0524 Acco-ChrAcco02 3711868 3712434 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0524 2 171 C2H2 Transcription Factor Family AT3G28210 62.941 1.73e-72 215