Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0505 ATGGTTGAAACCAGGCGCAGCTCCTCTTCTGCCAAGCGCTCTATCTCTTCACCCCCTCCCTCCAACGCCAAACGATCCAAGGTTTCCGAGGATGCGTCGTCAACCAGTCTCCCATCGGCTGTAATTTTTGGTCAGGTCAACGAATCTGGGAATGAATCTCGAGAACCGGAGCTACGCCCGTCTGATCTGCCAGATGCCGATTCGGTGAAGGCTGTAGACCTGAGTGACGCGAGGTTACCTGATAAATCCCCTGCAGCGGCTGTCGAAGGCGAGGCTCTGGTGTCACCGGGGTCTTCAGATGTTACTGCGGTGGAAGCGGAGAAATCAAAGTCTGTTGGTGTGGTGGCGCATGGGCGGCCGAAGAAACGCCCAACGAAATCCACAAAATCGAGTGCCAAGGCTGCATGGGGAAAGCTTCTTTCTCAGTCCTCTCAGAATCCTCATCTGTCCATGTACGGGCTCTTCACTGTTGGTCAAGGACGTCAGTGTGATTTATGTCTTAAAGATCCTGCTGTTAGTAATGTTTTGTGCAAATTGAGGCACATAGAGCGTGGAGGTTCATCTGTTGCATTACTGGAAGTTTTAGGAGGTAAAGGTGTTGTCCAAGTCAATGGCAGGAACCACCATAAAAATTCCCGTGTGATCTTAAGTGGTGGAGATGAGGTGGTCTTCAGTTCTTCTGGCAAGCATGCTTATATTTTTCAACAGCTCTCCAATAATAATATAACTACAACAGGGGTACCCCCTTCTGTTAGTATATTAGAAGCCCCAAGGGCACAGATTAAGGGAATGCGAATTGAAGGATCTGGGGACTCTTCAGCTGTTGCAGGGGCATCGATATTAGCTTCTTTATCTGACCTTCATAAAGATTTATCTCTTCCACCTCCTGCTAAAACTGGTGAGAATGCCACCCAGAATGCTGAGGTTTTGTCTGTAACTTCTGGCCATAGGGATGATAGTGGGGACAATGAATTGAAGGATGCCGCCAAAAATGATGATTCAACTGAGGCTATTGTATCTGAGAAAACTGTTCTTCCATCCTCTGCCGCCGCCAATGAAAACCCTAGTCTTGACAGCACTGGAGTAGATGCTGGTGTGGATGCAGATGTTGGGAAAGTAAATGGGGCTGCCTATGAATTAAGGCCACTGTTGCGCATGCTTGCTGGTTCTAGTACTGAATTTGATTTGGGTGGTAGTATTTCCAAAATATTGGAAGAGCGGAGGGATTTAAGAGAACTCCTTAAGGATTTTGACCCCCCTACAATCTTGGCATCAACAAGGCGGCAAGCATTTAAGGAGAGTTTACAACAAGGAATTTTAAATCCTGATGATATTGATGTCTCATTTGAAAGTTTCCCATACTTTCTAAGTGATACAACAAAGAATGTTTTGATTGCTTCTACATACATTCATTTGAAGTGCAATGGTTTTGCAAAGTATGCTTCAGATCTCCCTTCAGTGTGCCCAAGAATATTGTTATCTGGTCCTGCAGGTTCCGAGATATACCAGGAAACTTTGTCAAAGGCTCTCGCAAAGCATTTTGGTGCCAGGCTACTGATTGTAGATTCTCTTTCATTGCCTGGTGGGACGCCACCAAAGGAGTCCGATTCTGCTAAAGAAAGTTCTAGGCCTGAGAGAGCATCTATGTTCACAAAGCGAAGTGCACAGGCTGCTACATTACAGCATAAGAAGCCGACTTCTAGTGTTGATGCTGAGATTGTAGGAGGATCAACATTAAGTTCTCAGGCCATGTTGAAGCAAGAGGTATCTACTGCGTCATCTAAGGGCTCTACCATAAAAACAGGTGACAGAGTTAAATTCGTTGGTAATGTTCCTTCAGCCAGTATTTCGCTAACAAATTATCCTTCCAGGGGACCGAGCTATGGCTCCCGTGGAAAAGTTGTTCTTGCTTTTGAAGAAAATGGGTCATCAAAAATTGGAGTCAGGTTTGATAAGTCAATTCCAGATGGCAATGATCTTGGAGGCCTTTGTGAAGATGATCGGGGTTTCTTTTGTTCTGCTAATCATTTACTACGAGTTGATGGTTCTGGAGTAGATGACAACGACAAGCTTGCAATAAATGAAATTTTTGAGGTTGCCTCCAATCAAAGCAGAAGTGGTTCGCTAGTGTTGTTCATGAAAGATATAGAGAAAGCAATGGTTGGAAACACTGATGTTTTGAAGAGTAAGTTGGAAAGTTTGCATCCGAATGTTGTTGTGATTGGCTCGCATACCCAGCCAGACAACCGCAAGGAGAAGACCCACCCAGGTGGCCTTCTGTTTACAAAGTTTGGGAGCAATCAGACTGCACTGCTTGACCTTGCATTTCCGGATAATTTTAGCAGACTTCATGATAGGAGCAAAGAAACCCCCAAAACAATGAAGCAACTTAGTCGCCTTTTCCCCAACAAAGTGACAATACAGCTGCCTCAGGATGAGGCGTTGCTTTCTGATTGGAAACAACAGTTGGAACGAGATGTTGAAACTATGAAGACGCAGTCAAATGTTGCCAGCATTCGTACGGTTCTGAACAGGTTTGGATTGGATTGCCCTGATCTTGAGACTCTCTGCATTAAAGATCAAGCCCTAACAACTGAAAGTGTGGAAAAAGTCATCGGCTGGGCTATAAGTCATCATTTTATGCATCAATCGGAAGGTTCAATCAAAGACTCTAAGCTTGTGATATGTACTGAGAGCATTAAGTATGGGTTGAACATTCTACAGGGAATTCTAAGTGAAAACAAGAACTTAAAGAAATCACTCAAGGATGTGGTTACTGAGAATGAATTTGAGAAAAAGCTTCTTGCTGATGTTATTCCGCCCAGTGATATTGGGGTCACCTTTGATGATATTGGAGCGTTGGAAAATGTAAAGGACACCTTGAAGGAACTGGTCATGCTTCCTCTTCAGAGGCCTGAATTGTTCTGCAAAGGACAGTTGACTAAGCCTTGCAAGGGAATATTGCTCTTTGGGCCCCCTGGTACTGGGAAAACAATGCTTGCAAAAGCTGTAGCAACTGAGGCTGGAGCAAATTTCATCAACATTTCGATGTCAAGTATCACTTCAAAGTGGTTTGGTGAAGGAGAGAAGTATGTCAAAGCAGTCTTTTCTCTAGCAAGCAAAATTGCACCAAGTGTTATTTTTGTTGATGAGGTTGATAGCATGTTAGGAAGACGTGAGAATCCTGGTGAGCATGAAGCTATGCGTAAGATGAAGAACGAGTTTATGGTAAACTGGGATGGTTTGCGTACAAAGGATAAAGAGCGTATACTTGTTCTTGCTGCAACAAATAGGCCTTTTGACCTTGATGAGGCTGTTATTAGGAGGCTTCCTCGAAGATTGATGGTTAATTTGCCAGATGCTCCGAACAGAGAGAAAATTCTTAGAGTCATCTTAGCAAAAGAAGATTTGGCGCCTGATGTTGAGTTGGAAGCAATTGCGAATATGACTGATGGATATTCAGGAAGTGACTTAAAGAATCTGTGTGTTACAGCAGCTCATTGTCCAATTAGAGAAATCTTGGAGAAGGAAAAGAAGGAGAGAAGTTTGGCGTTATCTGAGAACAGACCCTTACCTGCATTATGTAGCGGTGCCGACATTCGACCCTTAAAGATGGAAGATTTCAAGTATGCACATGAGCAGGTGTGTGCAAGTGTGTCATCGGAGTCAACAAATATGAATGAACTACTCCAATGGAATGACCTTTACGGAGAAGGCGGATCCAGAAAAATAAGATCTCTGAGCTATTTCATGTAA 3756 0.439 MVETRRSSSSAKRSISSPPPSNAKRSKVSEDASSTSLPSAVIFGQVNESGNESREPELRPSDLPDADSVKAVDLSDARLPDKSPAAAVEGEALVSPGSSDVTAVEAEKSKSVGVVAHGRPKKRPTKSTKSSAKAAWGKLLSQSSQNPHLSMYGLFTVGQGRQCDLCLKDPAVSNVLCKLRHIERGGSSVALLEVLGGKGVVQVNGRNHHKNSRVILSGGDEVVFSSSGKHAYIFQQLSNNNITTTGVPPSVSILEAPRAQIKGMRIEGSGDSSAVAGASILASLSDLHKDLSLPPPAKTGENATQNAEVLSVTSGHRDDSGDNELKDAAKNDDSTEAIVSEKTVLPSSAAANENPSLDSTGVDAGVDADVGKVNGAAYELRPLLRMLAGSSTEFDLGGSISKILEERRDLRELLKDFDPPTILASTRRQAFKESLQQGILNPDDIDVSFESFPYFLSDTTKNVLIASTYIHLKCNGFAKYASDLPSVCPRILLSGPAGSEIYQETLSKALAKHFGARLLIVDSLSLPGGTPPKESDSAKESSRPERASMFTKRSAQAATLQHKKPTSSVDAEIVGGSTLSSQAMLKQEVSTASSKGSTIKTGDRVKFVGNVPSASISLTNYPSRGPSYGSRGKVVLAFEENGSSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSANHLLRVDGSGVDDNDKLAINEIFEVASNQSRSGSLVLFMKDIEKAMVGNTDVLKSKLESLHPNVVVIGSHTQPDNRKEKTHPGGLLFTKFGSNQTALLDLAFPDNFSRLHDRSKETPKTMKQLSRLFPNKVTIQLPQDEALLSDWKQQLERDVETMKTQSNVASIRTVLNRFGLDCPDLETLCIKDQALTTESVEKVIGWAISHHFMHQSEGSIKDSKLVICTESIKYGLNILQGILSENKNLKKSLKDVVTENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKILRVILAKEDLAPDVELEAIANMTDGYSGSDLKNLCVTAAHCPIREILEKEKKERSLALSENRPLPALCSGADIRPLKMEDFKYAHEQVCASVSSESTNMNELLQWNDLYGEGGSRKIRSLSYFM 1251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0505 1251 Gene3D - 1119 1213 - -
Acco02g0505 1251 Pfam ATPase family associated with various cellular activities (AAA) 987 1116 IPR003959 GO:0005524|GO:0016887
Acco02g0505 1251 CDD RecA-like_ATAD1 950 1116 - -
Acco02g0505 1251 Gene3D - 577 691 IPR047008 -
Acco02g0505 1251 Gene3D - 120 243 - -
Acco02g0505 1251 MobiDBLite consensus disorder prediction 291 365 - -
Acco02g0505 1251 ProSitePatterns AAA-protein family signature. 1090 1109 IPR003960 GO:0005524|GO:0016887
Acco02g0505 1251 MobiDBLite consensus disorder prediction 298 313 - -
Acco02g0505 1251 MobiDBLite consensus disorder prediction 527 548 - -
Acco02g0505 1251 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 429 1250 - -
Acco02g0505 1251 MobiDBLite consensus disorder prediction 1 51 - -
Acco02g0505 1251 MobiDBLite consensus disorder prediction 52 77 - -
Acco02g0505 1251 SMART AAA_5 983 1120 IPR003593 GO:0016887
Acco02g0505 1251 SUPERFAMILY SMAD/FHA domain 137 227 IPR008984 GO:0005515
Acco02g0505 1251 MobiDBLite consensus disorder prediction 1 134 - -
Acco02g0505 1251 MobiDBLite consensus disorder prediction 315 337 - -
Acco02g0505 1251 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 945 1121 - -
Acco02g0505 1251 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 946 1225 IPR027417 -
Acco02g0505 1251 Pfam AAA+ lid domain 1140 1176 IPR041569 -
Acco02g0505 1251 Gene3D - 945 1225 IPR027417 -
Acco02g0505 1251 MobiDBLite consensus disorder prediction 338 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0505 Acco-ChrAcco02 3592046 3602125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0505 982 1187 Calmodulin-binding Proteins AT3G56690 36.190 9.09e-32 132