Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0474 ATGGATACGGACACTCACAGTAATGAGTATGCTCGTAATGGTAAGGTCCTGCCTGGCTCGGCCACTCTTCTCTTCTTCATGTGCATCCTCCTCATCTTCCTTCACACCTACTCTTGCTCCTGCTTCCGCCGCCGTCGCCATTATCGACGCCTCTTACCGACTCCCTCTGGCGACCCTCACACGGCCCTTGACCCTTCTCTTTTCAAGTTCCTCCCCACCTTCACCTGCTCCTCCGCCACTCACCTCCACCTCCTCCAGGAATGTGCTGTCTGCCTGTCGGACTTCGAAGAAAACGAGGACGTTCGCGTTCTCCAAAACTGCAATCACTATTTCCATACTCATTGCATCGATACATGGTTCCGTTCTCACTCCAACTGCCCAATATGCCGAGCTCTGGTTCAACCGCCAAAAGAAAAAGAGGCGGCTGTTTCCGGTGGAGAGTTCGCGGGTTGCTCGTATCTTCCTCCGCCGATTTCGTGCCCGAAGAAGGAATTGGATTTAGATACGCTGACAGTGGTAGTGGAGGCCTGTAGGGAAGAAACGGGCGGGAATTTGATGAGTTCGGAGTCGGGTACACCCGGAGGTGCCCGATTTAAAAGTCCGATGGAGGGCATTTGGAGGGAGCAAAGGCGGTGA 636 0.5409 MDTDTHSNEYARNGKVLPGSATLLFFMCILLIFLHTYSCSCFRRRRHYRRLLPTPSGDPHTALDPSLFKFLPTFTCSSATHLHLLQECAVCLSDFEENEDVRVLQNCNHYFHTHCIDTWFRSHSNCPICRALVQPPKEKEAAVSGGEFAGCSYLPPPISCPKKELDLDTLTVVVEACREETGGNLMSSESGTPGGARFKSPMEGIWREQRR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0474 211 MobiDBLite consensus disorder prediction 183 211 - -
Acco02g0474 211 Pfam Ring finger domain 87 130 IPR001841 -
Acco02g0474 211 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 4 134 IPR044675 -
Acco02g0474 211 SMART ring_2 88 129 IPR001841 -
Acco02g0474 211 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Acco02g0474 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 136 IPR013083 -
Acco02g0474 211 CDD RING-H2_EL5-like 87 130 - -
Acco02g0474 211 SUPERFAMILY RING/U-box 87 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0474 Acco-ChrAcco02 3407893 3408528 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0474 7 147 Rapid Response to Elicitors AT3G16720 42.767 3.89e-31 114