Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0473 ATGAGAAGCATGTCAAAGCTGTCATTGGCATTAATGGCGGTCTGCGTCCTGATATTGACGCCGCACCAAATTAATGGGAAAGAAGACCAATTGAGAGGGGAAACGCTAATAAACAAGGTATGCGAGAAAACTCCATCAAAGGATGTGTGCGTAGAAACCCTAAAAAAGGACCCCAGAAGTGAAACGGCAGGGCTAAAAGAGGTGGCGTTGATGTCGGTGCAGGCGGCAAAGAACAATGCTTCTGAGATCATAAGCCACCTGAAGGTGCTGGTGGTGGACGACAGTTTGGAGCCAGACGTCCAACAGGGCATTTCCGATTGCTTGGATGTATTGGGAGACGCACAAGATCAGCTTAACACGGCGGCGGCGGCAATGCTGGCCAAGGCCGGAGAGGACACTGAGAAATGGCTGCAGGCGGCGGTGGACGCCGTGTCTACCTGTGAGGGTTTCCTGAATGGAGAAGATCAGATCCTCCTGCATAAAGAGGACAACTTCCGTCTCTTGTGCAACATTTCCTTGTCCATTTGCGAGGCTTTGGACAATAAAGAGGTCTAG 555 0.5081 MRSMSKLSLALMAVCVLILTPHQINGKEDQLRGETLINKVCEKTPSKDVCVETLKKDPRSETAGLKEVALMSVQAAKNNASEIISHLKVLVVDDSLEPDVQQGISDCLDVLGDAQDQLNTAAAAMLAKAGEDTEKWLQAAVDAVSTCEGFLNGEDQILLHKEDNFRLLCNISLSICEALDNKEV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0473 184 NCBIfam pectinesterase inhibitor domain 6 177 IPR006501 GO:0004857
Acco02g0473 184 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 179 IPR035513 -
Acco02g0473 184 SMART PMEI_2 32 175 IPR006501 GO:0004857
Acco02g0473 184 Pfam Plant invertase/pectin methylesterase inhibitor 36 175 IPR006501 GO:0004857
Acco02g0473 184 Gene3D Invertase/pectin methylesterase inhibitor family protein 33 179 IPR035513 -
Acco02g0473 184 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0473 Acco-ChrAcco02 3405550 3406104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0473 37 156 Carbohydrate Esterase AT5G53370 27.200 5.98e-08 49.7