Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0472 ATGGCTTCCAAGATACGTGCCCTCTCAACAACAATGGCGTTTCTTCTTCTCCTTCCCTTACTAACCACATTATCATTTGCAGATACTTCACCTTCAACTCCGATCAGCACAGGAACCGCATGTAGTTCCACACCTGACCCTTCTTATTGCAACTCCGTTCTCCCACCCAACCAGAAAGGCAATGTATACGACTATGGCCGCCTCTCCGTTAGCAAATCCCTATCACAGTCTCGTAAATTCTTGACCCTCGTCGATAAGTATCTCCAGCGACGATCTACTTTATCGGCCGCCGCCGTTCGTGCCCTCGAAGATTGCCGGACCCTGGGCGAGCTCAACTACGATTTCCTCTCAAATTCATTCCAAACTGTGAACAAGACCACTAGGTTTCTTCCCAGTTTACAAGCTGACGATATCCAAACCCTTCTCAGTGCTATCTTAACTAACCAACAGACCTGTTTGGATGGCCTTAAAGACACCGCTTCGGCTTGGAGCGTTAAGAACGGACTCTCCGTACCTCTTTCTAATGATACTAAGCTGTACAGTGTGTCTCTGGCTCTGTTCTCAAAAGGTTGGGTTCCTAATGCAAAGAAGAAAACCACGGCGTTTCAGCCAACCAAGAAACAGCTTGCCTTTGGAAATGGGCGATTGCCGCTTAAAATGTCAAGCAGGAACCTTGCCATCTACCGGTCAGTGAGTCAGAGAAAAATGCTTCAGACAGCCACCGTGGGCGGTGACGTGGTTGTGGTGAACGACATCGTGACGGTGAGACAGGACGGAACTGGAAACTTCACCACCATCAATGACGCCATTGCTGCCGCTCCAAACAAGTCTTCATCCTCTGCCGGCGGCTACTTCCTTATCTACGTCAGCGCAGGTGTTTACGAAGAATACGTCAACATTGATAAGAAGAAGACTTACTTGATGATGATGGGAGACGGTATCAACAAGACAATCATCACCGGCAACCGAAGTGTCATTGACGGCTGGACCACCTTCAACTCCGCAACTTTTGCTGTGTCAGGGCAAGGATTCGTGGGGCTGAACATGACGATTCGTAACACGGCGGGGCCAGAAAAGCACCAGGCGGTTGCACTTCGAAACGGAGCAGATTTATCGACGTTTTACAGTTGCAGCTTTGAAGGGTACCAGGACACATTATACGCGCATTCTCTGAGACAGTTCTACAGAGAATGTGATATATACGGCACCGTAGATTTCATATTCGGCAACGCCGCCGTGGTCCTCCAAAACTGCAATCTGTATCCTCGTTTACCCATGAGCGGGCAGTTCAACGCCGTCACGGCACAGGGGCGAACCGACCCGAATCAAAACACGGGCATTTCGATCCATAACTGCAGCATCAGAGCAACCGACGATTTGGCGGCCACCAATGGTTCTGTGAGCACGTATCTTGGGAGGCCATGGAAGGAGTATTCGAGGACGGTTTATATGGAGAGCTTCGTGGATAGCGTCATAGCGAGTGCGGGTTGGCAGAAATGGGACGGTGATTTTGCGTTAAGCACTCTGTATTATGCAGAGTTCAATAACTGGGGACCTGGGTCTGGCACCGCCGATAGAGTGACATGGCCTGGCTACCATGTCATTAACGCTACCGACGCTGCTAATTTCACAGTGGCCAACTTTTTGCTCGGAGATGACTGGTTGCCTCGCACTGGAGTCACTTACACCAGCACATTGATATAG 1704 0.4994 MASKIRALSTTMAFLLLLPLLTTLSFADTSPSTPISTGTACSSTPDPSYCNSVLPPNQKGNVYDYGRLSVSKSLSQSRKFLTLVDKYLQRRSTLSAAAVRALEDCRTLGELNYDFLSNSFQTVNKTTRFLPSLQADDIQTLLSAILTNQQTCLDGLKDTASAWSVKNGLSVPLSNDTKLYSVSLALFSKGWVPNAKKKTTAFQPTKKQLAFGNGRLPLKMSSRNLAIYRSVSQRKMLQTATVGGDVVVVNDIVTVRQDGTGNFTTINDAIAAAPNKSSSSAGGYFLIYVSAGVYEEYVNIDKKKTYLMMMGDGINKTIITGNRSVIDGWTTFNSATFAVSGQGFVGLNMTIRNTAGPEKHQAVALRNGADLSTFYSCSFEGYQDTLYAHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNLYPRLPMSGQFNAVTAQGRTDPNQNTGISIHNCSIRATDDLAATNGSVSTYLGRPWKEYSRTVYMESFVDSVIASAGWQKWDGDFALSTLYYAEFNNWGPGSGTADRVTWPGYHVINATDAANFTVANFLLGDDWLPRTGVTYTSTLI 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0472 567 CDD PMEI-like_3 39 191 - -
Acco02g0472 567 Gene3D - 247 566 IPR012334 -
Acco02g0472 567 ProSitePatterns Pectinesterase signature 2. 400 409 IPR033131 -
Acco02g0472 567 SMART PMEI_2 30 186 IPR006501 GO:0004857
Acco02g0472 567 PANTHER PECTINESTERASE 21 556 - -
Acco02g0472 567 SUPERFAMILY Pectin lyase-like 249 565 IPR011050 -
Acco02g0472 567 Pfam Pectinesterase 253 552 IPR000070 GO:0030599|GO:0042545
Acco02g0472 567 Pfam Plant invertase/pectin methylesterase inhibitor 39 186 IPR006501 GO:0004857
Acco02g0472 567 NCBIfam pectinesterase inhibitor domain 12 187 IPR006501 GO:0004857
Acco02g0472 567 FunFam Pectinesterase 38 189 - -
Acco02g0472 567 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 189 IPR035513 -
Acco02g0472 567 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 189 IPR035513 -
Acco02g0472 567 FunFam Pectinesterase 247 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0472 Acco-ChrAcco02 3401625 3403422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0472 8 567 Carbohydrate Esterase AT4G02330 61.739 0.0 722