Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0471 ATGGCTTTCAAGCTCTTGCCCCTTCTTGCCCTCTCATCCTTTTACTTTTACTTAATATTCCTTTCCTCCTCTGTGTCGTTGTCAATGGCAGTACCCCATCAGAATCAGAATAAGCATGGAAAAGGTCACGCTGCTCCGGCAACCACCTGCGACTCCAAAAAAAACCCTTCTCATTGTAAACATGTTCCTCCGGGTCACCACTACGGCAATAACGTATATGACGATGGCCGTAACTCTGTTAAGAGATCCTTAGCTCATTCCCACAAGTTTCTCAACTTAGTCGACTCCTACCTTCGATCTCCCTCCTATTATTCTCAGTCCACTGTTCGAGCTCTTCAAGATTGTCAACTCCTCTCTGAATTAAACTATGAATACTTCTCAACCTGCTACTCCACTGTCAACCAATCCAGCTCTGTTCTTCCCTACTCTCAAGCCGAATATATACAAACCGTGCTCAGTGCCATCCTCACTAACCAACTCACTTGTTTGGATGGCCTTCAGACTACGGCTTCAGATCCAAAAGTCAAGGACGATCTCTCCGTCCCACTCTTCAACGACACTGACCTTCACAGTGTCTCTCTTGCTCTGTTCGTGAAGGGCTGGGTCCCTCAAAAGAAAAACAAACAACTGTCTTTGTCCAAAGGTGGAAAAAATTTAGGTTTCCATTATGGACATTTGCCTATGAAGATGCCAAGGCCAGCACGAAACATATATGAGCATGCCAGAAGACAGGGCAGAAAATTGCTTCAAACTCTCACTGACATAACAAGCGTCGTCTTAAGCGACATCGCGGTCGTTAGTCAGGACGGAAGCGGAAACTTCACCACCATCAATGACGCCATAGCGGCCGCCCCCAGCAAAACCGCTGCCAACAGTGGCTATTTCTTGATTTTTATCACGGGGGGTGTGTATGAAGAATACGTCAACATAGATAAAAACAAATGGAACCTGATGCTTTTGGGAGACGGAATCAATCGCACGGTGATCACCGGCAATCGCAGTGTTGCCGATGGGTGGACAACTTTCAATTCAGCAACATTCGCTGTAGTAGGACAAGCATTCGTCGCAGTGAACATAACAGTGAGGAACACAGCAGGGCCAAGCAAAAGGCAAGCAGTGGCATTAAGAAATGGAGCAGACATGTCTGTTTTCTACAGCTGCAGCTTCGAGGGGTACCAGGACACTCTGTATACACATTCTATGAGGCAGTTTTACAGAGAATGTGACATATATGGAACGGTGGACTTCATATTCGGTAACGCTGCTGTTGTATTACAAAACTGCAACATATATCCACGCTTGCCCATGAGTCAACAGTTCAACGCTATCACAGCACAAGGTCGAACTGACCCGAACCAGAACACAGGCATTTCCATACAAAACGCCACTATAAATGCTGCCGACGATCTCATGAGTGCTCTCCAGAATGGTACGGTGGTGAAGACTTACCTGGGGAGGCCATGGAAGCAGTACTCGAGGACAGTTTACCTGCAGAGTTTCATGGACAGTTTGATAGATGCTTCGGGTTGGCGGGAATGGGATGGAGCTTTTGGTTTGGATACGCTGTACTATGCAGAATATGAAAACAGGGGACCCGGTTCTGGTACTGGGAACAGAGTAACGTGGCCTGGTTTCCATCTGATTAATGCTACGGATGCCGATAATTTCACGGTGGCTAATTTCGTGCAAGGCAATGTTTGGCTGCTTCGCACCGGCGTCCCCTTCCTCACTGGTTTGATTTAG 1743 0.4705 MAFKLLPLLALSSFYFYLIFLSSSVSLSMAVPHQNQNKHGKGHAAPATTCDSKKNPSHCKHVPPGHHYGNNVYDDGRNSVKRSLAHSHKFLNLVDSYLRSPSYYSQSTVRALQDCQLLSELNYEYFSTCYSTVNQSSSVLPYSQAEYIQTVLSAILTNQLTCLDGLQTTASDPKVKDDLSVPLFNDTDLHSVSLALFVKGWVPQKKNKQLSLSKGGKNLGFHYGHLPMKMPRPARNIYEHARRQGRKLLQTLTDITSVVLSDIAVVSQDGSGNFTTINDAIAAAPSKTAANSGYFLIFITGGVYEEYVNIDKNKWNLMLLGDGINRTVITGNRSVADGWTTFNSATFAVVGQAFVAVNITVRNTAGPSKRQAVALRNGADMSVFYSCSFEGYQDTLYTHSMRQFYRECDIYGTVDFIFGNAAVVLQNCNIYPRLPMSQQFNAITAQGRTDPNQNTGISIQNATINAADDLMSALQNGTVVKTYLGRPWKQYSRTVYLQSFMDSLIDASGWREWDGAFGLDTLYYAEYENRGPGSGTGNRVTWPGFHLINATDADNFTVANFVQGNVWLLRTGVPFLTGLI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0471 580 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
Acco02g0471 580 Gene3D - 258 579 IPR012334 -
Acco02g0471 580 Pfam Pectinesterase 264 565 IPR000070 GO:0030599|GO:0042545
Acco02g0471 580 CDD PMEI-like_3 48 197 - -
Acco02g0471 580 PANTHER PECTINESTERASE 30 568 - -
Acco02g0471 580 MobiDBLite consensus disorder prediction 35 56 - -
Acco02g0471 580 SMART PMEI_2 41 196 IPR006501 GO:0004857
Acco02g0471 580 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 48 197 IPR035513 -
Acco02g0471 580 FunFam Pectinesterase 258 579 - -
Acco02g0471 580 Gene3D Invertase/pectin methylesterase inhibitor family protein 46 199 IPR035513 -
Acco02g0471 580 Pfam Plant invertase/pectin methylesterase inhibitor 47 193 IPR006501 GO:0004857
Acco02g0471 580 SUPERFAMILY Pectin lyase-like 260 578 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0471 Acco-ChrAcco02 3382046 3383868 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0471 45 580 Carbohydrate Esterase AT4G02330 57.741 0.0 638