Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0469 ATGGGTCACGGGTTCGACCTGTGTTGGGTGTCCCCAACATCATCCCAACTTGTCTCTGTTCCTCACTTTCTCCCTCTTTTTCCAAATTTCACCATGCATAACCTCAACACAAGATCAGCTCTTTCCCTCGCTCTCTTGCTCCTTCTCTCTTTAGTCTCTGTGCTTCACTTTTTTCAGTTCCGCAATGCCAGCCTCTCAAAAACACACTTCCATTTACAAATACACCTGCAAGTAGCCCAATCCACATGCCGAGGAACACTCTACCCAAAACTCTGCGTTTCAACACTTTCTTCCCTTCCATATCTTCCCTCCAAATCTGTCCCACAAATCATCTCCTCTGTGATTAGTCACGCGGTGTCGGAGGTGAAATCCTCGTCCCATAACTGCAATGGCCTCCGAAACAACCTCCGGAACCTCGACCCACTCGAACAGAGAGCCCTTAATGACTGTCTCGGACTGTTTGATGACACTGTCTACGAGCTCGACGCCACTGTGGCTGATCTCTCCGGTGCCGAAATAGGCTTCAGGCGTTACCGTGACTTGCAGACGCTGCTTAGTGGGGCAATGACTAACCTGTACACGTGTCTTGATGGGTTTGCTTATAGCCGAGGGAATGTGAGGGAGAGGATCCAGGACCGGTTGTTTGAGATCTCGCGTCATGTCAGTAACTCACTAGCCATGCTCAAGAACGTTCCCGGACTGAAGCAGAAAGCTTCCGAGCCTGAGATCTTCGCGGAGTACGGAAACATGAAAAATGGGTTCCCTTCGTGGTTGTACTCGAGAGAACGAAATCTCCTGGAAGCTAATGTGAATGAAACGAGGTTCGATCTTGTGGTGGCAAAAGATGGCACGGGCAATTTCACTACTATTGGTGAGGCTTTGAATGCAGCTCCAAATTCCAGCACAAGCAGGATTGTGATACACATAAAAGCGGGGGCGTACTTTGAGAATGTGGAGGTGATCAGGAAAAAGACCAATTTGATGTTCGTCGGTGATGGAATTGGGAAGACCATTGTGAAAGCCAGTAGGAATGTCGTCGACGGATGGACGACTTTCCAGTCAGCCACCGTAGCGGTGGCGGGAACGGGATTTATCGCGAAGGGCGTGACTTTCGAGAACTCAGCCGGAGCGAGCAAGCACCAAGCCGTGGCTCTGCGAAACAGTGCCGATTTATCAGCATTCTACAAATGCAGCTTTGTTGGCTATCAAGACACTCTCTACGTCCATTCCCTCCGACAGTTCTACCGAGACTGCGACATTTACGGCACCGTCGACTTCATCTTCGGCAACGCCGCCGCCCTCTTCCAAAATTGCAACTTATACGCCCGCAAGCCTCTCCTAAACCAGAAAAACATGTTCACCGCTCAGGGCAGAGACGACCCCAACCAGAGCACCGGCATTTCCATCCTGAACTGTAAAGTCGCCGCCGCCGAGGATTTAAGGCCCGTCAAGTCCTCATTCAAGACCTACTTGGGACGCCCCTGGAAGCCCTATTCCAGGACGGTTTATCTGAGATCTTACATGGAGGATCTGATTGAGCCTGCTGGGTGGTTGGCATGGAACGGAACGTTGGGCCTGGACACGTTGTATTATGGGGAGTACATGAATAGTGGTCCTGGTTCTAATACGAGCGCCAGAGTGAGATGGCCTGGTTTCAGGGTCATCAACTCCTCCGCCGAGGCTTCTCAGTTCACCGCCGCACGGTTTATTCAGGGATATGACTGGTTGAATTCCACTGCCATTCCCTTTTACCTTGACTTGATCTGA 1767 0.5088 MGHGFDLCWVSPTSSQLVSVPHFLPLFPNFTMHNLNTRSALSLALLLLLSLVSVLHFFQFRNASLSKTHFHLQIHLQVAQSTCRGTLYPKLCVSTLSSLPYLPSKSVPQIISSVISHAVSEVKSSSHNCNGLRNNLRNLDPLEQRALNDCLGLFDDTVYELDATVADLSGAEIGFRRYRDLQTLLSGAMTNLYTCLDGFAYSRGNVRERIQDRLFEISRHVSNSLAMLKNVPGLKQKASEPEIFAEYGNMKNGFPSWLYSRERNLLEANVNETRFDLVVAKDGTGNFTTIGEALNAAPNSSTSRIVIHIKAGAYFENVEVIRKKTNLMFVGDGIGKTIVKASRNVVDGWTTFQSATVAVAGTGFIAKGVTFENSAGASKHQAVALRNSADLSAFYKCSFVGYQDTLYVHSLRQFYRDCDIYGTVDFIFGNAAALFQNCNLYARKPLLNQKNMFTAQGRDDPNQSTGISILNCKVAAAEDLRPVKSSFKTYLGRPWKPYSRTVYLRSYMEDLIEPAGWLAWNGTLGLDTLYYGEYMNSGPGSNTSARVRWPGFRVINSSAEASQFTAARFIQGYDWLNSTAIPFYLDLI 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0469 588 PANTHER PECTINESTERASE 52 577 - -
Acco02g0469 588 FunFam Pectinesterase 270 587 - -
Acco02g0469 588 Pfam Pectinesterase 276 572 IPR000070 GO:0030599|GO:0042545
Acco02g0469 588 SUPERFAMILY Pectin lyase-like 275 585 IPR011050 -
Acco02g0469 588 SMART PMEI_2 74 227 IPR006501 GO:0004857
Acco02g0469 588 CDD PMEI-like_3 81 233 - -
Acco02g0469 588 Pfam Plant invertase/pectin methylesterase inhibitor 80 227 IPR006501 GO:0004857
Acco02g0469 588 ProSitePatterns Pectinesterase signature 2. 420 429 IPR033131 -
Acco02g0469 588 Gene3D - 270 587 IPR012334 -
Acco02g0469 588 NCBIfam pectinesterase inhibitor domain 48 230 IPR006501 GO:0004857
Acco02g0469 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 76 231 IPR035513 -
Acco02g0469 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 80 231 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0469 Acco-ChrAcco02 3372174 3376436 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0469 101 587 Carbohydrate Esterase AT4G02320 52.400 0.0 541