Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco02g0457 | ATGCCTGACGTTGTTGACTCTTACGCTGCTTGTTATTACTCTGTGCTTGGCATAAGCAAGCAGGCCACCAATTGTGAAATCCGAGGCGCTTATCGTAAGATGGCTCTGAAATGGCATCCTGACAGGTGGATTAAAGACCCAAAGCTTACGATGGAAGCTAAAACACGGTTTCAGCAAGCTCAAGAGGCCTATTCGGTTTTGTCTAATAAAGGGAAGAGAGCCATATATGATGCTGGCTTGTTTGGTCTCATTGGAGACAACGACGATGAGGGATTTGTTGATTTCATGCAAGAAATGATCTTGATGGCGCAAACAGAGAGCCCCCAGGAATACACGCGGGAGGATCTTGAGAGATTGCTAATTGACATGATGGACGGCCACGGTAATGAAGGAACGGCGAAATCTGAGTTTCAAGCCGCCACTCCCGCAAAGAAGATTCCTATCAAATGA | 450 | 0.4644 | MPDVVDSYAACYYSVLGISKQATNCEIRGAYRKMALKWHPDRWIKDPKLTMEAKTRFQQAQEAYSVLSNKGKRAIYDAGLFGLIGDNDDEGFVDFMQEMILMAQTESPQEYTREDLERLLIDMMDGHGNEGTAKSEFQAATPAKKIPIK | 149 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco02g0457 | 149 | MobiDBLite | consensus disorder prediction | 130 | 149 | - | - | |
| Acco02g0457 | 149 | SMART | dnaj_3 | 10 | 72 | IPR001623 | - | |
| Acco02g0457 | 149 | ProSitePatterns | Nt-dnaJ domain signature. | 57 | 76 | IPR018253 | - | |
| Acco02g0457 | 149 | CDD | DnaJ | 11 | 69 | IPR001623 | - | |
| Acco02g0457 | 149 | Gene3D | DnaJ domain | 5 | 106 | IPR036869 | - | |
| Acco02g0457 | 149 | ProSiteProfiles | dnaJ domain profile. | 11 | 80 | IPR001623 | - | |
| Acco02g0457 | 149 | PANTHER | PUTATIVE, EXPRESSED-RELATED | 9 | 140 | - | - | |
| Acco02g0457 | 149 | SUPERFAMILY | Chaperone J-domain | 11 | 99 | IPR036869 | - | |
| Acco02g0457 | 149 | PRINTS | DnaJ domain signature | 13 | 31 | IPR001623 | - | |
| Acco02g0457 | 149 | PRINTS | DnaJ domain signature | 31 | 46 | IPR001623 | - | |
| Acco02g0457 | 149 | PRINTS | DnaJ domain signature | 52 | 72 | IPR001623 | - | |
| Acco02g0457 | 149 | Pfam | DnaJ domain | 12 | 77 | IPR001623 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco02g0457 | Acco-ChrAcco02 | 3311059 | 3311897 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco02g0457 | 11 | 78 | C2H2 Transcription Factor Family | AT1G74250 | 47.826 | 2.19e-14 | 67.4 |