Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0452 ATGGCCACCAGAAATCGAACTGTGCTATTTAGAAAGCACAGAGATGCCGTCAAGAGTGTGCGAGCCCCTTTATCTTCCTCAGCTTCTGGTTCTGGCGGCCCCGTTATTGAAATGGTGAGCACTTCACTTCTTCGTTCGAATCAATCTGCATATGCTCCTCTAAGCACCGAAGATCCAGGCCCTTCGAGTTCGAGAGATGCATTCACTGTGGGGTTGCCACCAGCTTGGGTAGATGATTCTGAAGAAATAGCTGCAAATATACAGCGTGCTCAGGCTAAAATGTCTGAGCTAGTCAAACTTCATGCAAAAGCATTAATGCCCTCTTTCGGTGATGGTAAAGAAGATCAACAACAGATTGAGATTCTCACCCAGGAGATTACAACTCTCTTGAGAAAATCTGAGATGAAGCTAAAAAGACTTTCTGCCACCGGCGGGTCCTCTGAGGATTCAAACATTAGAAAAAATGTGCAGCGCTCCCTTGCTACAGACCTTCAGAACCTGTCAATGAACCTCCGGCGAAAGCAATCACAATACTTGAAACGGTTGCGGCAGCAAAAGGAGGGATATGATGGGGTTGACTTGGAGATGAATGTGAATGGGTATAAATTTGGTTCGCAGGATGATGGATTCAGTGATGTGGGTTTCAGTGATCATCAAATGGCAAAGCTAAAGAAGAGTGAGCAATTCTCGGAGGAAAGGGAAAGAGAGATTGAACAGGTCACTAAATCAGTGAATGAACTGGCTCAGATCATGAAGGATCTCTCTGTTCTTGTGATAGACCAGGGAACAATTGTGGATAGAATTGACTACAACATTCAGAATGTCGCTACGTCCGTTGAAGAGGGCTTCAAGCAATTGGAGAAGGCTGAGAGAACACAACAAAAAGGAGGAATGGTTACGTGTGCAACTGTGCTTGTTATAATGTGCTTCGTCATGCTAGTCCTCTTGATACTCAAGGAGATATTGTTTTAG 972 0.4465 MATRNRTVLFRKHRDAVKSVRAPLSSSASGSGGPVIEMVSTSLLRSNQSAYAPLSTEDPGPSSSRDAFTVGLPPAWVDDSEEIAANIQRAQAKMSELVKLHAKALMPSFGDGKEDQQQIEILTQEITTLLRKSEMKLKRLSATGGSSEDSNIRKNVQRSLATDLQNLSMNLRRKQSQYLKRLRQQKEGYDGVDLEMNVNGYKFGSQDDGFSDVGFSDHQMAKLKKSEQFSEEREREIEQVTKSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQNVATSVEEGFKQLEKAERTQQKGGMVTCATVLVIMCFVMLVLLILKEILF 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0452 323 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 227 289 IPR000727 -
Acco02g0452 323 FunFam Syntaxin-43 73 281 - -
Acco02g0452 323 SUPERFAMILY t-snare proteins 72 282 IPR010989 GO:0016020|GO:0016192
Acco02g0452 323 Coils Coil 80 100 - -
Acco02g0452 323 PANTHER SYNTAXIN 79 309 IPR045242 -
Acco02g0452 323 CDD SNARE_syntaxin16 231 288 - -
Acco02g0452 323 SMART tSNARE_6 222 289 IPR000727 -
Acco02g0452 323 SMART SynN_4 67 183 IPR006011 GO:0016020
Acco02g0452 323 Gene3D - 73 281 - -
Acco02g0452 323 Pfam SNARE domain 263 315 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0452 Acco-ChrAcco02 3269010 3273508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0452 1 323 SNARE and Associated Proteins AT5G26980 71.341 1.38e-164 459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0452 02 3269010 3273508 Acco02g0452 02 3269010 3273508 ECH
Acco02g0452 02 3269010 3273508 Acco06g0224 06 1484538 1487574 ECH