Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0443 ATGAAGTGGTCTATAAAGGGCGTGAGCTTTGCTATTCGAAGCGCACGAGTAGAGGCAGCTAGGTATAGAAAGATGTCTGATGATAATGGCAGTGCACTAAAACTATTCGGTTTCTCATTGAGAGAGCCGGAAGAATTTGGTGAAAGAATTAGAGAGGAAGTGGAAGATGAGAGGAAATTCAGGTGCCATTATTGCAAGAAAGCATTCACAAACTCACAAGCATTAGGGGGTCACCAAAATGCTCATAAGAGAGAGCGCTTAAGAGCCAGGCGTTTACATAGCCGACACACCGATCCCAGACGCATCATACCACAACCACCACCCTTCACCGCCGCGGCCGCCACCAACTACCGCCAACCACCGCGCATTCTCTTCAAATCCAATACAGCCCACTTTTCATCTACGCCCATTTTCATTCCTTCGCCTTATCCCACTACTACTTCTTCCAGGTTACCATTTCAGCTCCAATATGCCTCACCCTCCCTACAACAATCATCGCCTTCTCATGTTGCTGCGCTAATGCCACAGAGGGATGTGGGTGTTAATGTTGATGTCCATCTAAGGTTGTCTCTCTCAGATTAG 582 0.4742 MKWSIKGVSFAIRSARVEAARYRKMSDDNGSALKLFGFSLREPEEFGERIREEVEDERKFRCHYCKKAFTNSQALGGHQNAHKRERLRARRLHSRHTDPRRIIPQPPPFTAAAATNYRQPPRILFKSNTAHFSSTPIFIPSPYPTTTSSRLPFQLQYASPSLQQSSPSHVAALMPQRDVGVNVDVHLRLSLSD 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0443 193 ProSitePatterns Zinc finger C2H2 type domain signature. 62 82 IPR013087 -
Acco02g0443 193 Gene3D Classic Zinc Finger 46 102 - -
Acco02g0443 193 ProSiteProfiles Zinc finger C2H2 type domain profile. 60 87 IPR013087 -
Acco02g0443 193 PANTHER ZINC FINGER PROTEIN 5 29 191 IPR044299 GO:0010090
Acco02g0443 193 SUPERFAMILY beta-beta-alpha zinc fingers 56 87 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0443 Acco-ChrAcco02 3214712 3215293 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0443 33 94 C2H2 Transcription Factor Family AT5G06650 46.575 1.63e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco02g0443 None None None