Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0418 ATGGCTTCGAATCACCGTCCAGCAAGTTCGGGATCTGATGACCCAATGTCTGATGTCGTGGACGAGAGGAAGAGGAAGAGGATGCAGTCTAACCGTGAATCCGCGAGGCGGTCGCGGATGAAGAAGCAGAAGCAACTTGAAGATCTGACCAATGAGATCAGCCGATTGCAGAGTGCAAACAGTCTTTTAGTTCAGAACATAAAGGAGAAGGAGGATGCATACAATGAGATCGAATCCAACAACACTGTCCTTAGAGCGCAGACTATGGAGTTGTTCGAACGATTGCGTTTTCTGAACTCGATGCTTGAGATCGCTGAAGAGGTCAGCGGGCTCTCTATTGAGATCCCCGAGATACCAGATCCTCTCCTAAAGCCATGGCAGCTTCCTTATCCGATACAGCCGATCACGGCTTCAGATTTCGTCCTGCATTGA 432 0.4931 MASNHRPASSGSDDPMSDVVDERKRKRMQSNRESARRSRMKKQKQLEDLTNEISRLQSANSLLVQNIKEKEDAYNEIESNNTVLRAQTMELFERLRFLNSMLEIAEEVSGLSIEIPEIPDPLLKPWQLPYPIQPITASDFVLH 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0418 143 MobiDBLite consensus disorder prediction 1 47 - -
Acco02g0418 143 CDD bZIP_plant_GBF1 24 75 IPR045314 GO:0003700|GO:0006355
Acco02g0418 143 Gene3D - 21 75 - -
Acco02g0418 143 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 21 84 IPR004827 GO:0003700|GO:0006355
Acco02g0418 143 Coils Coil 32 87 - -
Acco02g0418 143 SUPERFAMILY Leucine zipper domain 23 76 IPR046347 GO:0003700|GO:0006355
Acco02g0418 143 Pfam bZIP transcription factor 23 81 IPR004827 GO:0003700|GO:0006355
Acco02g0418 143 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 26 41 IPR004827 GO:0003700|GO:0006355
Acco02g0418 143 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 107 - -
Acco02g0418 143 FunFam BZIP transcription factor 21 72 - -
Acco02g0418 143 SMART brlzneu 19 83 IPR004827 GO:0003700|GO:0006355
Acco02g0418 143 MobiDBLite consensus disorder prediction 16 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0418 Acco-ChrAcco02 3051003 3051434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0418 10 138 bZIP Transcription Factor Family AT3G62420 56.589 3.48e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Acco02g0418 bZIP_1 7.2e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0418 02 3051003 3051434 Acco06g0372 06 2323560 2324003 CCT
Acco02g0418 02 3051003 3051434 Acco02g0418 02 3051003 3051434 ECH