Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0411 ATGGGTGATAATGGTTCTGTGTCCACAGAACTTGAGTCTGAAGCATCTCCTGAGCTCAGCGCAAAAGAATCTCAACCACTCAAAAAACGGAAGACAGTTCAGAAAACAGTTGTGACAGTGAGAGTTGGAGAAAACGCAAGCAAACTTAAGAACGAAGGGCTGGCTTCTGATTCCTGGTCTTGGAGAAAATACGGACAAAAGCCTATTAAAGGATCTCCTTACCCAAGGGGCTACTACAAGTGCAGCACATCCAAGGGTTGTTCGGCCAGAAAGCAAGTGGAGAGATGCAGAACAGATGCTTCAATGTTCATCGTTACTTATAACTCTACTCATAACCATCCGCCTCCTGATCGTCCCTCCAACTCCAATCTGAACCTACCACAAGAATCCCAAAACCAGGCCATTGAAGATCTCTCAGAGACCTCGAAAGTGGAAGACCAGGAAGAGAAAGAGAAGGAAAAGGATCATAAGCCCATGGCAGGCCATGACCAATGTGAAAACAAAGAAAATTTCTATTACTTGCAATCGCCAATTCAGTGCTCTGAAGACATTATTGTTGACCAAGAAGACCCTTTCGAACTGAACCCAGATAAAACACATGGTACAATAGATCTCCTCCTTGATAAAGAGCTCCCGAGTAATTCTGAGCTCAAGAACCCGTCAACACCCAAATCCGAAGAACATGACTTTTTCGATGAACTTGAAGAGCTACCCATATCTTCACCTTTCTTAAATTTAACGAGTCGTAATTTCTCAGAGGAGAGGATAGTAGTTGCCCCTTCATGA 786 0.4377 MGDNGSVSTELESEASPELSAKESQPLKKRKTVQKTVVTVRVGENASKLKNEGLASDSWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSARKQVERCRTDASMFIVTYNSTHNHPPPDRPSNSNLNLPQESQNQAIEDLSETSKVEDQEEKEKEKDHKPMAGHDQCENKENFYYLQSPIQCSEDIIVDQEDPFELNPDKTHGTIDLLLDKELPSNSELKNPSTPKSEEHDFFDELEELPISSPFLNLTSRNFSEERIVVAPS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0411 261 SUPERFAMILY WRKY DNA-binding domain 53 116 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g0411 261 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 14 242 IPR044810 GO:0003700
Acco02g0411 261 Gene3D WRKY domain 40 117 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g0411 261 FunFam WRKY transcription factor 65 38 116 - -
Acco02g0411 261 MobiDBLite consensus disorder prediction 107 138 - -
Acco02g0411 261 MobiDBLite consensus disorder prediction 1 20 - -
Acco02g0411 261 ProSiteProfiles WRKY domain profile. 50 116 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g0411 261 MobiDBLite consensus disorder prediction 1 33 - -
Acco02g0411 261 MobiDBLite consensus disorder prediction 107 164 - -
Acco02g0411 261 Pfam WRKY DNA -binding domain 57 114 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g0411 261 MobiDBLite consensus disorder prediction 139 164 - -
Acco02g0411 261 SMART WRKY_cls 55 115 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0411 Acco-ChrAcco02 3003300 3004301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0411 18 116 WRKY Transcription Factor Family AT1G30650 57.000 1.17e-33 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco02g0411 WRKY 1e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0411 02 3003300 3004301 Acco02g0411 02 3003300 3004301 ECH