Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0404 ATGGGAGTTTCTTCACAGCCTTCCCCTGTTCCTATTTCTTTCAAATATTTGGTTAAGGGAGCTGATGAAGTTGAAACTAAGAACTCGTCGTCGTATGGGTATCTGCAGGGAAAATTGATGGAATCCCAGAAGGCGACGATGATGAGCAAGAAAAGCGTCAAGAGCAGAAGAACGCGGGGAAGGATTGTAATGAAGAGGAGGGCTCGGTTGATGGAAAGTTCAAGAAGGCGAGCCAAGAAGATAGAGAGAAGGGTGACCAAGTTGAAGAGGCTCGTACCCAACGGTGAGTCGGTGATGGGGTTGGATGGTCTCTTCAGGAAGACGGCCCATTACATTTTGACTTTGCAAATGAGAATGAGAGTCATGCAGATTATGGTGAAGGTATTGACTGATTCTGACCAGTGA 405 0.4642 MGVSSQPSPVPISFKYLVKGADEVETKNSSSYGYLQGKLMESQKATMMSKKSVKSRRTRGRIVMKRRARLMESSRRRAKKIERRVTKLKRLVPNGESVMGLDGLFRKTAHYILTLQMRMRVMQIMVKVLTDSDQ 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0404 134 Coils Coil 71 91 - -
Acco02g0404 134 CDD bHLH_AtIBH1_like 72 126 IPR044549 GO:0006355
Acco02g0404 134 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 46 129 IPR044660 GO:0006355
Acco02g0404 134 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 65 115 IPR011598 GO:0046983
Acco02g0404 134 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 66 125 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0404 Acco-ChrAcco02 2964436 2964840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0404 54 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 50.000 1.45e-20 78.6