Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco02g0403 | ATGGAGAAGAAGGAGAAGTGCGGTACGACGGAAGATGCCTCCGGGTCGTCTTCATTGTCGGGTTACAATAATGGTTATCCATTATTATCGAATGCTTTTGAGTTTTCTGAAGTGGAAAAGAGCTCTCTTGGCTTTATGGAGTTGCTGGGTCTCCAAGACTATAGCTCTCTGCTTCATTTGCCGTCACAGCAGCAAGTATCAACTCTTAAAGACCCCTCTGCTCTGAAAGATCTGTCTGATACGGCCCAGGAGTGTTCCGAGGTCTCCAATCAACAACCTGCGACCCCCAACTCTTCATCGATTTCGTCGGCGTCCAGTGGGGCCATCACCGTCAATGAAGAGCACAATAGAACATCTGACCAACCTGAAGAACACTCCAAGACCAAGAAACTATTGAAAGCCAAGAAGACAAATCAGAAGAGACGGAACGAGCCGAGATTCGCTTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTTAAAAACAGCTCTTTTCCCAGGAGCTATTATCGTTGCACCACCGCTTCGTGTAATGTAAAGAAACGAGTGGAGCGATCTTTCAACGATCCTAGCATTGTAGTAACAACTTATGAGGGTCAGCACACACATCCAAGCCCAGTTATGCCTCGCTCCCACCTCGCCGGAATCGATGCTTCACTTCCGGCTGGTGTCTCTGCTGGTTGTACCACCTCCTTCGGTTCCCTGATGGCAGGAAACCTATTGTCCCAGTATCATCATCATCCTCCGCAACGACAACTTGTTCTCAATAATAGTAATAGTACACTATCGTCCACGGGCTCTCCCAACAATAGCAATACTGATTCAACTTCAAAGAACGCTGCATTTGTTTTTGCTCATCAAGACAGAAGATTTTGTAATTCTGGAACCACCGCAGCTTTTCTAAGAGACCACGGGCTTCTTCAAGATATTGTTCCTTCACATATGTTGAAAGAAGAGTAG | 996 | 0.4639 | MEKKEKCGTTEDASGSSSLSGYNNGYPLLSNAFEFSEVEKSSLGFMELLGLQDYSSLLHLPSQQQVSTLKDPSALKDLSDTAQECSEVSNQQPATPNSSSISSASSGAITVNEEHNRTSDQPEEHSKTKKLLKAKKTNQKRRNEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSSFPRSYYRCTTASCNVKKRVERSFNDPSIVVTTYEGQHTHPSPVMPRSHLAGIDASLPAGVSAGCTTSFGSLMAGNLLSQYHHHPPQRQLVLNNSNSTLSSTGSPNNSNTDSTSKNAAFVFAHQDRRFCNSGTTAAFLRDHGLLQDIVPSHMLKEE | 331 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco02g0403 | 331 | SMART | WRKY_cls | 158 | 217 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Acco02g0403 | 331 | ProSiteProfiles | WRKY domain profile. | 153 | 218 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Acco02g0403 | 331 | Gene3D | WRKY domain | 133 | 219 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Acco02g0403 | 331 | Pfam | WRKY DNA -binding domain | 159 | 216 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Acco02g0403 | 331 | SUPERFAMILY | WRKY DNA-binding domain | 150 | 218 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Acco02g0403 | 331 | MobiDBLite | consensus disorder prediction | 80 | 115 | - | - | |
Acco02g0403 | 331 | MobiDBLite | consensus disorder prediction | 80 | 142 | - | - | |
Acco02g0403 | 331 | MobiDBLite | consensus disorder prediction | 116 | 130 | - | - | |
Acco02g0403 | 331 | MobiDBLite | consensus disorder prediction | 268 | 287 | - | - | |
Acco02g0403 | 331 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Acco02g0403 | 331 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 89 | 276 | IPR044810 | GO:0003700 | |
Acco02g0403 | 331 | PIRSF | WRKY_txn_fact_IIc | 1 | 331 | IPR017396 | GO:0003700 | |
Acco02g0403 | 331 | FunFam | WRKY transcription factor 57 | 144 | 218 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco02g0403 | Acco-ChrAcco02 | 2955814 | 2957355 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco02g0403 | 26 | 331 | WRKY Transcription Factor Family | AT2G47260 | 45.272 | 2.50e-64 | 205 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Acco02g0403 | WRKY | 2.3e-26 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Acco02g0403 | 02 | 2955814 | 2957355 | Acco06g0349 | 06 | 2192613 | 2193983 | CCT | |
Acco02g0403 | 02 | 2955814 | 2957355 | Acco02g0403 | 02 | 2955814 | 2957355 | ECH |