Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0403 ATGGAGAAGAAGGAGAAGTGCGGTACGACGGAAGATGCCTCCGGGTCGTCTTCATTGTCGGGTTACAATAATGGTTATCCATTATTATCGAATGCTTTTGAGTTTTCTGAAGTGGAAAAGAGCTCTCTTGGCTTTATGGAGTTGCTGGGTCTCCAAGACTATAGCTCTCTGCTTCATTTGCCGTCACAGCAGCAAGTATCAACTCTTAAAGACCCCTCTGCTCTGAAAGATCTGTCTGATACGGCCCAGGAGTGTTCCGAGGTCTCCAATCAACAACCTGCGACCCCCAACTCTTCATCGATTTCGTCGGCGTCCAGTGGGGCCATCACCGTCAATGAAGAGCACAATAGAACATCTGACCAACCTGAAGAACACTCCAAGACCAAGAAACTATTGAAAGCCAAGAAGACAAATCAGAAGAGACGGAACGAGCCGAGATTCGCTTTCATGACGAAAAGCGAGGTGGATCATCTGGAAGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTTAAAAACAGCTCTTTTCCCAGGAGCTATTATCGTTGCACCACCGCTTCGTGTAATGTAAAGAAACGAGTGGAGCGATCTTTCAACGATCCTAGCATTGTAGTAACAACTTATGAGGGTCAGCACACACATCCAAGCCCAGTTATGCCTCGCTCCCACCTCGCCGGAATCGATGCTTCACTTCCGGCTGGTGTCTCTGCTGGTTGTACCACCTCCTTCGGTTCCCTGATGGCAGGAAACCTATTGTCCCAGTATCATCATCATCCTCCGCAACGACAACTTGTTCTCAATAATAGTAATAGTACACTATCGTCCACGGGCTCTCCCAACAATAGCAATACTGATTCAACTTCAAAGAACGCTGCATTTGTTTTTGCTCATCAAGACAGAAGATTTTGTAATTCTGGAACCACCGCAGCTTTTCTAAGAGACCACGGGCTTCTTCAAGATATTGTTCCTTCACATATGTTGAAAGAAGAGTAG 996 0.4639 MEKKEKCGTTEDASGSSSLSGYNNGYPLLSNAFEFSEVEKSSLGFMELLGLQDYSSLLHLPSQQQVSTLKDPSALKDLSDTAQECSEVSNQQPATPNSSSISSASSGAITVNEEHNRTSDQPEEHSKTKKLLKAKKTNQKRRNEPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSSFPRSYYRCTTASCNVKKRVERSFNDPSIVVTTYEGQHTHPSPVMPRSHLAGIDASLPAGVSAGCTTSFGSLMAGNLLSQYHHHPPQRQLVLNNSNSTLSSTGSPNNSNTDSTSKNAAFVFAHQDRRFCNSGTTAAFLRDHGLLQDIVPSHMLKEE 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0403 331 SMART WRKY_cls 158 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g0403 331 ProSiteProfiles WRKY domain profile. 153 218 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g0403 331 Gene3D WRKY domain 133 219 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g0403 331 Pfam WRKY DNA -binding domain 159 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Acco02g0403 331 SUPERFAMILY WRKY DNA-binding domain 150 218 IPR036576 GO:0003700|GO:0006355|GO:0043565
Acco02g0403 331 MobiDBLite consensus disorder prediction 80 115 - -
Acco02g0403 331 MobiDBLite consensus disorder prediction 80 142 - -
Acco02g0403 331 MobiDBLite consensus disorder prediction 116 130 - -
Acco02g0403 331 MobiDBLite consensus disorder prediction 268 287 - -
Acco02g0403 331 MobiDBLite consensus disorder prediction 1 23 - -
Acco02g0403 331 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 89 276 IPR044810 GO:0003700
Acco02g0403 331 PIRSF WRKY_txn_fact_IIc 1 331 IPR017396 GO:0003700
Acco02g0403 331 FunFam WRKY transcription factor 57 144 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0403 Acco-ChrAcco02 2955814 2957355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0403 26 331 WRKY Transcription Factor Family AT2G47260 45.272 2.50e-64 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Acco02g0403 WRKY 2.3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0403 02 2955814 2957355 Acco06g0349 06 2192613 2193983 CCT
Acco02g0403 02 2955814 2957355 Acco02g0403 02 2955814 2957355 ECH