Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0394 ATGGGCTCAAAGATGGTAGGGGAGTATGCAGCAAATCAAAGTGAAGACAATATGTGCGTGAGGAAAGGTCCATGGACTGTTGAAGAGGACACCATTCTCGCCAATCACGTGGCCACTCATGGTGAAGGTTGCTGGAATATGGTCGCTCGCTGTGCAGGTCTGAATAGAACGGGCAAAAGTTGCAGATTGAGATGGCTAAACTACTTGCGTCCCGATGTTCGGCGCGGAAATATCACACTCCAAGAACAGATATTGATTCTCGACCTCCATTCTCGCTGGGGAAATAGGTGGTCGAAAATTGCAGAGCATTTGCCAGGAAGGACAGACAACGAGATCAAAAATTATTGGAGAACCAGAGTGATAAAGCAGGCGAAGCAGCTCAAGTGTGAGGTCAACAGCAAACAGTTCAGAGACGCCCTGCGTTACGTTTGGATTCCCCGCTTGCTGGAGCGGGTTCGAGCCTCGTCCGAAGATCAACCCAGTTCGGGGACAGAGCGGAGAAGACCCAATTACTGTTGCACCCCCGTCTATGCGGGACCAGAACCACGAATCTCTTCGAATTCAGACAGCAGCGAAACAACGGATCATCCAATAGGAAACGGGTCAGTGACCCAGGCCGCAGGACAGGGAGACTCGCTGGAGAATCTGTGGAGCGATGAGAATATATGGTTCTTACGGCAACAACTATGTGATGAATTCTAA 702 0.5014 MGSKMVGEYAANQSEDNMCVRKGPWTVEEDTILANHVATHGEGCWNMVARCAGLNRTGKSCRLRWLNYLRPDVRRGNITLQEQILILDLHSRWGNRWSKIAEHLPGRTDNEIKNYWRTRVIKQAKQLKCEVNSKQFRDALRYVWIPRLLERVRASSEDQPSSGTERRRPNYCCTPVYAGPEPRISSNSDSSETTDHPIGNGSVTQAAGQGDSLENLWSDENIWFLRQQLCDEF 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0394 233 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Acco02g0394 233 CDD SANT 24 69 IPR001005 -
Acco02g0394 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Acco02g0394 233 MobiDBLite consensus disorder prediction 155 207 - -
Acco02g0394 233 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
Acco02g0394 233 MobiDBLite consensus disorder prediction 181 207 - -
Acco02g0394 233 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 19 186 IPR044676 GO:0003700|GO:0006355|GO:0043565
Acco02g0394 233 FunFam MYB transcription factor 79 142 - -
Acco02g0394 233 Gene3D - 23 74 - -
Acco02g0394 233 FunFam Myb transcription factor 22 74 - -
Acco02g0394 233 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Acco02g0394 233 Pfam Myb-like DNA-binding domain 75 118 IPR001005 -
Acco02g0394 233 Pfam Myb-like DNA-binding domain 22 69 IPR001005 -
Acco02g0394 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 69 IPR017930 -
Acco02g0394 233 CDD SANT 79 118 IPR001005 -
Acco02g0394 233 Gene3D - 79 120 - -
Acco02g0394 233 SMART sant 74 122 IPR001005 -
Acco02g0394 233 SMART sant 21 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0394 Acco-ChrAcco02 2895048 2896002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0394 15 230 MYB Transcription Factor Family AT2G47190 52.000 8.90e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco02g0394 Myb_DNA-binding 2.3e-16 CL0123