Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0375 ATGGATGACTGCTGTGCTGTTTGCGCCGAACCTTTGGAATGGGTTGCGTACGGCCCCTGTTTGCATCGGGAGGTTTGCTCGACCTGCGTAGCTCGTCTCCGTTTCATATGCGACGATCGCCGTTGTTGCATCTGCAAGACCCAGTGCGACCGTGTTTTTGTCACAAAGGCTCTAGGAGATTTTACAAGGGTGATTAATAACTTCTCAGTACTCCCATCTGATGTAAGGGAGGGTCAGGTGGGTTCGTACTGGTACCATGAGGATACAAATGCTTTTTTTGATGATGTGGACCACTACAAGATGATCAAGGCTATGTGCAAGCTTTCATGTAGTGTATGCGACAAGAAGGAGGAGCAAGCACCTGATGCCTCAAAGCGTCGAGCAAGGTTTAGGAATATAGAACAGCTAAAGGGTCACTTGTTCCACGTTCACAGGTTGCGCATGTGCAGTTTATGTTTGGAAGGAAGGAAGGTATTTATTTGTGAACAAAAGCTATATACTAGAGAACAGTTTAATCAGCATATAAGTACAGGTGATTCTGAGGTGGATGGAAGTGAGAGTGAGAGGGGTGGTTTTATGGGGCATCCTATGTGTGAATTCTGCCGAACCCCATTTTATGGGGACAATGAACTCTACACTCATATGTCAACAGAACATTTTACTTGTCATATATGCCAAAGGCAACATCCAGGACGCTATGAATATTATAAGAATTATGATGACTTAGAGATCCACTTCCGTCAAGAGCACTTCTTATGTGAAGATGAAGCCTGCCTTGCTAAAAAGTTCATTGTATTTCAATCTGAAGCAGAGATGAAGAGGCATAATGCTATTGAACACGGAGGGCGAATGTCAAGGTCAAAACGCAATGCTGCTCTTCAGATTCCAACTAGCTTCCGATACAGACATGGTAATCAAGAAGATCAACGGCGTGGAAGAGGTCAGACATTTCGTCGTGATCTTTCTGAAAGTGAACTTTCTATGGCCATTCAAGCCAGTTTTGACACTGCTAGTGCAGACAGCACGGGTCATGATCCAGCTACATCAAGCAGTGGACAAGTTGCTGTTGGTTATGGGAGCTTCAATGATGACCCAGGCATCCAATCATCTGAATCCCTAGGTACATCAAGTTCTGAATTGTCGTCAAGGTACCTCCAAGCCTTGGGACATAATTCAGGGAGCTCACCATTGGAAGGTTCCTCCTTTCCTCCTCTTCCCATAGCGTCAATCAATGGCCAAGCAAAGCCCAAAAATGAACCTGAAGGTTCTTCTAGTAACACTATGGCAGCACATTTGCATCGGCATAACAACAGAAATGCATCTGCTCTTAATTCTGCTAATGGATGGTCAGTTGCAAGTCGTGGATCTGTGCAATCGTCAAGTAATCCTATGCGATCTAAAAGGCCAACAAATGTTGCTCCTGGTGCGTCAGGTAATTCCAGTCAGGCAAAGATTGTCATTAATCATGGACCTGGACCTTCAACCTATGCTAGTTCTGTCCAGGCTACGCAGAGAACTGCTCAGGGGCATTTGTCTTCTGGCACGTCAAGAGACATATGTGACAATGGTAGAATCATTCATTCTGCTTCTGCTCCAAATCTCATTGAAAATGGTTCTTTGGAACCCTCCTTTTCTGATTTTCCTCCAGTATCAGCTACAAAAGCAAACAAGTTGACTGCAAGTAGTCAATCTTTGGCAGTGACAAATGTGGAGGATGTTCATTCTGCTAACAAGTCATTGGTTGAAAAGATTCGCGGTGCCCTTGATTTTGACCAAGAAAGATACACCATTTTTAAAGACGTTTCTGCACAATATCGCCAAGGAATAATTGATGCAGGCACATATTTGGATTATGTGCAGCAGTTTGGCTTGTCTCATCTGGTACTTGAGTTAGCTAGACTGTGCCCTGATCCGCATAAGCAGAAGGAACTCATTGATTTTCACAATGCGAGTATGCAAAGAATTGCTTTACAAGAAAATGATCGGGGTGGCGGTAGTATCCATCACAAAGATGGCAAGGTCTCCAAGAAAGGTAAAGGTAAAGGTAAAGGTAAAGGGAAGTCTATAGAAATTGAAGAGAGGAACTGTAAACATAATTTAGAAGATAGCTTTGTAAGCACTGTACGTCAATTACAGTTGAATCATAAACCTTCAGAAGAGAATGTGGAGGTACTATCAAAGGGTGATTACCGTATTGCCAAAGATAAGTCAAAAAATTTGGCTGATGAACAATTGATTGGTATGAATTCTCGTAGTCTACCCAACCCAAAGCAGGCTGAGGAGAGTGAAGCATCGCTTGGCAGTTTTCCTAACCTAAGTAAAGATGAGGGGGCTAGTGGGATCAAGCAACGTAAGAAAACTTCTAAGTTCATTAGAATGCGCCTTGGTGATGGTTCTGTAGAAGCATTGTTGGATCATAAGAGTTCAAATGCCAACTCAGATCCGGGATCAACGGAGGCCTTGGATGGTAATAAGAACGGTGCTGGAGGGCTGCCTGTGCGAGGTGTTTGGCGGAATGGAGGTCATAAACTCTTCTCCTAG 2541 0.438 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTQCDRVFVTKALGDFTRVINNFSVLPSDVREGQVGSYWYHEDTNAFFDDVDHYKMIKAMCKLSCSVCDKKEEQAPDASKRRARFRNIEQLKGHLFHVHRLRMCSLCLEGRKVFICEQKLYTREQFNQHISTGDSEVDGSESERGGFMGHPMCEFCRTPFYGDNELYTHMSTEHFTCHICQRQHPGRYEYYKNYDDLEIHFRQEHFLCEDEACLAKKFIVFQSEAEMKRHNAIEHGGRMSRSKRNAALQIPTSFRYRHGNQEDQRRGRGQTFRRDLSESELSMAIQASFDTASADSTGHDPATSSSGQVAVGYGSFNDDPGIQSSESLGTSSSELSSRYLQALGHNSGSSPLEGSSFPPLPIASINGQAKPKNEPEGSSSNTMAAHLHRHNNRNASALNSANGWSVASRGSVQSSSNPMRSKRPTNVAPGASGNSSQAKIVINHGPGPSTYASSVQATQRTAQGHLSSGTSRDICDNGRIIHSASAPNLIENGSLEPSFSDFPPVSATKANKLTASSQSLAVTNVEDVHSANKSLVEKIRGALDFDQERYTIFKDVSAQYRQGIIDAGTYLDYVQQFGLSHLVLELARLCPDPHKQKELIDFHNASMQRIALQENDRGGGSIHHKDGKVSKKGKGKGKGKGKSIEIEERNCKHNLEDSFVSTVRQLQLNHKPSEENVEVLSKGDYRIAKDKSKNLADEQLIGMNSRSLPNPKQAEESEASLGSFPNLSKDEGASGIKQRKKTSKFIRMRLGDGSVEALLDHKSSNANSDPGSTEALDGNKNGAGGLPVRGVWRNGGHKLFS 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0375 846 MobiDBLite consensus disorder prediction 300 322 - -
Acco02g0375 846 MobiDBLite consensus disorder prediction 336 427 - -
Acco02g0375 846 MobiDBLite consensus disorder prediction 448 519 - -
Acco02g0375 846 SMART c2h2final6 220 250 IPR013087 -
Acco02g0375 846 SMART c2h2final6 251 280 IPR013087 -
Acco02g0375 846 SMART c2h2final6 196 219 IPR013087 -
Acco02g0375 846 SMART c2h2final6 108 144 IPR013087 -
Acco02g0375 846 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Acco02g0375 846 MobiDBLite consensus disorder prediction 804 846 - -
Acco02g0375 846 MobiDBLite consensus disorder prediction 336 399 - -
Acco02g0375 846 MobiDBLite consensus disorder prediction 805 820 - -
Acco02g0375 846 CDD RING-HC_ZNF598 3 54 IPR041888 -
Acco02g0375 846 PANTHER ZINC FINGER PROTEIN 598 1 752 IPR044288 GO:0061630|GO:0072344
Acco02g0375 846 MobiDBLite consensus disorder prediction 743 769 - -
Acco02g0375 846 MobiDBLite consensus disorder prediction 741 785 - -
Acco02g0375 846 MobiDBLite consensus disorder prediction 303 320 - -
Acco02g0375 846 MobiDBLite consensus disorder prediction 660 693 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0375 1 846 C2H2 Transcription Factor Family AT3G62240 52.644 0.0 818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0375 02 2772253 2777012 Acco02g0375 02 2772253 2777012 ECH