Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0371 ATGACAACGCTCACTCTCTTGCAACTTCTTGGCGGCGGCGAAATTGGAAGTGACGCTCAAATTTTCATTAACAACTACGTTGTTTTTGTATGGGAGCGTCTCAGTCCACAGCACATCACCCAGAACGAAGAGCAAGCACCGATATGTACCAATATCACACCTCCTCCCAAATCTCAATCAGATTCACATCACCGTCATCATCACGACCGTTTCCGTCCTCTGAACCTATCCTCTCATCTCTTCCTCGTACGGAGCATATTTTCCGACACTCGATCGCCGCCTTTTATTTGCCGTCGATTTCGCTACTGCCGATGCCAATATTCTGACTTTAGCGGCTGTCTCCCATCTTCGGCCTCTGTCTTTCAGATTGAACTTCTCAGTGCTTTAGCTTATAGCTTGGATGCTGTAGTTGACTTTGGAGGGATTGGTGGTTACTTGGTTCTTGTTGGCTATGTGGGTTGCCCTCTATTGGAATCATGGAGGCGTGGGTATTGGGACAATTCGGTTGCGATTATGGAAGCTAGATCTGGCCCTGAAGCTTTTCACTTCTATGGAATTGGTTCATCTGACTTGCGGGGAGTGGGGAAGAGGTCTGTTGAATGGGATTTGAACGATTGGAAGTGGGATGGTGATCTTTTCTTAGCTAGCCCGCTGACACCAGTGCCTGAAGATAGCGTTGGCCGAAAATTTTTCCCTCTTGGGTCTGGGATCCCCGTGGCCGGAGGGTCCTCTAACAGTTCTTCCTCCTGCTCGGATGAAGTAAATCTAGGGATTGACAAGCGGAAGAAGGAAGGAGAAAGGAAAAGAAGGGTTATTGTGGTGGATGATGACAGCTTGAATGAGGGAGCAGGTGGCCTTAGCTTAACGATTGGGGGGCATGATTCTCCTATTGTTGATAGGGATATGGCAACTTGGGAAGGAATGAATGGAAAGAAAACCAGATTATCTGGAGGCTCTGCAAATCGAGCTGTTTGTCAGGTGGAGGACTGTGGCGCAGATCTGAGCAGTGCTAAGGATTATCATAGGCGCCATAAAGTTTGTGAGATGCATTCAAAGGCTAGCAGGGCACTTGTGAGGAATGTAATGCAGCGATTCTGTCAGCAGTGTAGTCGGTTTCACATCCTTGAAGAGTTTGATGAAGGGAAGAGAAGTTGTCGAAGACGCTTGGCAGGCCACAATAAAAGGAGGAGGAAAACAAATAATGATGCTGTTCCTAATGGCAGTTCAATAAACGATGATCAGACTAGCAGTTACCTGTTGATTACATTGTTGAAGACACTTTCAAATATGCATTCTAACAGGTCAAATCAGACCACAGATCAAGATTTGCTATCTCATCTTGTAAAGGGCCTAGCTAGTCAAAATGGTGAACACGGGGCCAAGAACTTGTCTAACCTTTTGCGGGAACCAGAGAATTTGTTGAAAGAAGGGAGTTCTTCTGGTAAGTCAGATATGGTTTCTGCTTTATTCTCTAATGGTTCTCAAATCTCTCCAACTGTTATGGGACAACCACAAACAATATCTATGACTGAAATTCAACATCAAGGGATGCATGAAGCTGGGGCTGCTGACCAACAAACTATGTCTTCCACTAAACCTAGCATTACAAACAGTCCTCCAGTTTACTCTGAAGCCAGGGACAGTGTTGCTGGACAGGTCAAGATGAATAATTTTGATTTGAATGACATATATATTGACTCAGACGATGGCATAGAAGATATTGAAAGATTGCCTGTCTCTGCAAACCTTGGGGCTAGTTCTCTTGATTACCAGTGGGCACAGCTAGACTCTCATCAATCAAGCCCACCTCAGGCAAGTGGAAATTCAGATTCTGCATCTGCTCAGTCCCCTTCTAGTTCAAGTGGAGAAGCTCAGAGCCGCACAGATCGAATTGTTTTCAAGCTCTTTGGTAAAGAGCCAAATGATTTTCCTCTTGTACTTAGAGCACAGATTCTTGACTGGCTATCCCACAGTCCTACTGACATTGAGAGCTACATACGGCCTGGATGTGTTGTTTTGACCATTTATCTACGTCAGACGGAGGCTGTGTGGGAGGAGCTTTGCTATGGTCTCACTTCAAGTTTGAATAGGCTTATCGACGTCTCAGATGGTGACTTTTGGAAAACTGGATGGGTTTACACAAGAGTGCAGCATCAGATAGCCTTCATTGTCAATGGTCAGATTGTCATAGACAGATCCTTACCTTTAAGGAGTAAAAATTATAGTAAGATTGTGAGTGTTAGTCCAATTGCTGTACCGTCATCCAAAAGAGCTCAATTTTCAGTCAAGGGTGTCAATCTGATTCGCCCAGCCACTAGGTTATTATGTGCTATAGAAGGGAAATATATGGTCTGTGAAGATGCTCAGGAGCCGACTGAGCAGTGCTCCAAAGAGCTTGATGAGCTCCAGTGCGTCCAATTTTCATGTTCTGTTCCTGTGATGAATGGAAGAGGATTTATTGAGATTGAGGACCAGGGCTTGAGCAGCAGCTTTTTTCCTTTCATAGTTACAGAAGAGGATGTTTGCTCAGAAATCTGTGCACTTGATCCTCTACTAGAATCAGGCAAAGCTGACTCTGATATTGGAGGATCTGGAAAATTTATGGCCATAAGTCAAGCCATGGATTTTATTCATGAAATGGGATGGCTTCTCCACAGGAACCAATTGAAATCTAGGCTGGTTCAGCTAAACTCTAATGTAGATCTTTTTCCGTTAAAACGGTTCAAGCAGCTCATGGAGTACTCTATGGACCATGATTGGTGTGCAGTGGTGAAGAAACTACTGAACCTATTACTTGATGGAACCGTGGATGCAGGAGATCACCCATCCCTATATCTGGCACTTTCAGAGATGGGTCTCCTTCATAAAGCTGTAAGGAGGAATAGCAGGCAGTTGGTGGAGTTGCTTTTGAGATATGTCCCAGAGAAAATTTCTGATAAACTGGGACCGGAAAACGAGGCACTATCTGACGTTGGGAACCAGAGCTTCTTGTTTAGACCTGACATTGTTGGTCCTGCATGCTTGACGCCACTTCATATTGCAGCTGGGAAAGATGGCTCTGAGGATGTGTTAGATGCTTTAACAAATGATCCTTGCATGGTAGGAATTGAAGCATGGAAGAGTGCACGTGACAGCACTGGCTTTACACCTGAAGATTATGCACGCTTGCGTGGTCATTATGCATACATTCACTTGGTTCAGAAGAAAATCAACAAGAGACAAGGAGCAGCTGCATCTCATGTGCTGGTAGATATCCCCAGCAATCTGACTGAGTCTAGTATACATCAGAAGCAAACCGAGACTTCCACTACCTTTGAGATCGGAAAGGTGGAAGGAAGCCGTGCGCAAGGGCATTGCAAACTTTGCGACCTTAAATTGTCTTGTCGGACTGCAGTTGGAAGGACTATTGTGTACAAACCTGCCATGCTTTCAATGGTGGCGGTAGCTGCAGTGTGTGTCTGCGTGGCCCTTCTGTTCAAAAGCTCGCCTGAAGTTCTGTATGTGTTCCAACCCTTCAGGTGGGAGTCGCTGGATTTCGGAACAAGCTGA 3549 0.4522 MTTLTLLQLLGGGEIGSDAQIFINNYVVFVWERLSPQHITQNEEQAPICTNITPPPKSQSDSHHRHHHDRFRPLNLSSHLFLVRSIFSDTRSPPFICRRFRYCRCQYSDFSGCLPSSASVFQIELLSALAYSLDAVVDFGGIGGYLVLVGYVGCPLLESWRRGYWDNSVAIMEARSGPEAFHFYGIGSSDLRGVGKRSVEWDLNDWKWDGDLFLASPLTPVPEDSVGRKFFPLGSGIPVAGGSSNSSSSCSDEVNLGIDKRKKEGERKRRVIVVDDDSLNEGAGGLSLTIGGHDSPIVDRDMATWEGMNGKKTRLSGGSANRAVCQVEDCGADLSSAKDYHRRHKVCEMHSKASRALVRNVMQRFCQQCSRFHILEEFDEGKRSCRRRLAGHNKRRRKTNNDAVPNGSSINDDQTSSYLLITLLKTLSNMHSNRSNQTTDQDLLSHLVKGLASQNGEHGAKNLSNLLREPENLLKEGSSSGKSDMVSALFSNGSQISPTVMGQPQTISMTEIQHQGMHEAGAADQQTMSSTKPSITNSPPVYSEARDSVAGQVKMNNFDLNDIYIDSDDGIEDIERLPVSANLGASSLDYQWAQLDSHQSSPPQASGNSDSASAQSPSSSSGEAQSRTDRIVFKLFGKEPNDFPLVLRAQILDWLSHSPTDIESYIRPGCVVLTIYLRQTEAVWEELCYGLTSSLNRLIDVSDGDFWKTGWVYTRVQHQIAFIVNGQIVIDRSLPLRSKNYSKIVSVSPIAVPSSKRAQFSVKGVNLIRPATRLLCAIEGKYMVCEDAQEPTEQCSKELDELQCVQFSCSVPVMNGRGFIEIEDQGLSSSFFPFIVTEEDVCSEICALDPLLESGKADSDIGGSGKFMAISQAMDFIHEMGWLLHRNQLKSRLVQLNSNVDLFPLKRFKQLMEYSMDHDWCAVVKKLLNLLLDGTVDAGDHPSLYLALSEMGLLHKAVRRNSRQLVELLLRYVPEKISDKLGPENEALSDVGNQSFLFRPDIVGPACLTPLHIAAGKDGSEDVLDALTNDPCMVGIEAWKSARDSTGFTPEDYARLRGHYAYIHLVQKKINKRQGAAASHVLVDIPSNLTESSIHQKQTETSTTFEIGKVEGSRAQGHCKLCDLKLSCRTAVGRTIVYKPAMLSMVAVAAVCVCVALLFKSSPEVLYVFQPFRWESLDFGTS 1182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0371 1182 MobiDBLite consensus disorder prediction 595 626 - -
Acco02g0371 1182 Gene3D - 906 1073 IPR036770 -
Acco02g0371 1182 MobiDBLite consensus disorder prediction 516 546 - -
Acco02g0371 1182 ProSiteProfiles Zinc finger SBP-type profile. 322 399 IPR004333 GO:0003677
Acco02g0371 1182 MobiDBLite consensus disorder prediction 389 410 - -
Acco02g0371 1182 Gene3D - 316 386 IPR036893 GO:0003677|GO:0005634
Acco02g0371 1182 SUPERFAMILY Ankyrin repeat 950 1065 IPR036770 -
Acco02g0371 1182 Pfam SBP domain 325 398 IPR004333 GO:0003677
Acco02g0371 1182 SUPERFAMILY SBT domain 323 403 IPR036893 GO:0003677|GO:0005634
Acco02g0371 1182 FunFam Squamosa promoter-binding-like protein 14 316 386 - -
Acco02g0371 1182 MobiDBLite consensus disorder prediction 520 543 - -
Acco02g0371 1182 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 252 1065 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0371 Acco-ChrAcco02 2744830 2754279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0371 172 1182 SBP-box Gene Family AT3G60030 55.199 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco02g0371 SBP 2.9e-29 No_clan