Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0370 ATGTCATCATTCGTGAACCGGAAGCGGCCGGGGGCGGACGAGCGGAGCTGCAATACGCCTCAGCTAAAGATCTCTGTGTGGTGGGACATTGAGAACTGTCAGGTTCCAAAGGGCTGCGACACTCACGCCATTGCTCAGAATATTAGTTCTGCACTTGTCAAGATGAACTATTGTGGTCCCGTCTCCATCTCCGCCTACGGCGACACAAGTCGGATCCCACCCTCCTTTCAGAAAGCACTTTCTAGCACCGGAATGTCTCTCAACCACATTCCAGCCGGTATCCATCTCCTTCTGTTCTCAGCCTTTTCGGCAATGGTTTTGTCAAAGAGTTTTGACATAAGTGTTGCTCTTGTGTGGTCTCGGATGGTAATGTCACTATTTATGCATGAAGGTGTAAAAGATGCCAGTGATAAGAAAATTCTAGTTGATATGTTGTTATGGGCAGTAGACAACCCTGCTCCAGCAAATTATTTGCTGATTTCTGGAGACAGGGATTTCTCAAATGCTCTGCATCAGCTGCGCCTGAGAAAATACAACATTCTTCTAGCACAACCACCAAAAGCATCAGCTCCTCTGGTTGCAGCAGCAAAATGTGTATGGCTCTGGACCAGCCTTTTATCTGGTGGGGCCCCTCTACCAAGTGGTGAATCATTATTCCTTGCAAGTGGCAACCACGTGTCTAATTCTGAGAAGATTCAAAACCCAGTTGCTGAGCCTAATCAAACAAGTCAGCCACTGGTTCTCAATTCTGAAAATCGTGACGGGGGAAGTCAAATAACTCAAAATACCTTTACAACTAGAAGGGTTGGTGATTTGGAACCCAAAGTAAAATACGTTTTGAAAACTGACAATCAGCCCAACCTATCTACAATCTCTTCAAGCTTACCTTTTACAGGTTCAGGAGGTAAGAACAATGATCCTCTTAAACCAGCACACTCACCCATGAAGCAGTTCCGAAAAGCTCCGCATGAATTCTTTAGTAGTGAGCCTGCAGTCCCCAATGGTAGGTTTACTCCTAACCTTGTAAGCAACCAAGATTGCTCAGGAAATAAAAGGGGCATCTCTAATGAAATTTCTCAGGATCTTTATCATAGTTCTCTGAGGTCAAAAGACCTTGATATACAGCCCATGTCTGGACTTGATGGGCCTCTTCCCGATTCTCATACTCGGACATTTCAACCAGTATCTCCTCATTCGGATGCACCTAAATCGACTACAGCCCCAATTTTATTTAAAATTATACCTAAGCCACATAATTCTTCAAATTCTAGGAATATCAAAAGTACTCTTATTTGTCATCAGCAAACCAGGGACAACCCTAATCCAAGTACTGTTCAAAATCCTAATCTACAGAGCTTACAAGTATCCCCAGCAGGCTACAACCCATCAAGTGGCCAAGCATTTCAGTATGAGAATTTGAACCCGAGGCGTCCTTGTGGTTCTCAACATTTGCTTTCTCCTTCCCTCACTGGAATTGTCAATACCAGTTCTAAGAATGTTATTTTGAGAGTTCAGGGACGTCCACCACATTCTGAGTATGAGCAAGGCCTCGTCGATGTTATTTTACTAGCCTTAAACACTCTGAAGGTTGAAAAGGTTATGCCAACTGAAGCAAATATTATTGATTGCATTTCTTATGGAGATTCCAAATATCGGACTACTGATGTCAAGAAGGCCTTAGATTGTGCAATCAAGCTAAATGAGGTAGTAAAACCAAGACTAGGTGCATTAGAGTTTTATATCGGTAGATTCGAGACTCTATGGGATTGTGTAAATATTATAGGTGGTAATGTTGATCAGCATCCAAAAACAACATGGGATCGGATAGAAGAGTTCCTTGCTTCATCATCCGGACGATCAGCAATTTTGTCTTCCCAGTGCAGATATGAATCATCTATAATTCTACGGAAAGAATGCCTTACAGGGCTTGTGTTAGGAGAGGTACTTCAGATCTTGAATATGATCATCTTGGTCAAGAAATGGATTACAATTCATCGGCTTTATACTCTGCACATGTCCATCTGCACGCAGAAGAACCTTAATCTTAGCAGAAGAGAGACGCGGGAGGTTCTGCTGGCATATGATATGTTTTTGATTGCTCTACATATGGTCCATTCCCCGGAGAAGACATGTTCACTGAAGCTTTTTGTTCCCCCTGTTTTCCTTTCTAAACGTGAAGTACGGGCTTGTGCGCCTGCTATATTTTTAAAAATCAAGTGGCTTGGAGCTTGA 2232 0.4301 MSSFVNRKRPGADERSCNTPQLKISVWWDIENCQVPKGCDTHAIAQNISSALVKMNYCGPVSISAYGDTSRIPPSFQKALSSTGMSLNHIPAGIHLLLFSAFSAMVLSKSFDISVALVWSRMVMSLFMHEGVKDASDKKILVDMLLWAVDNPAPANYLLISGDRDFSNALHQLRLRKYNILLAQPPKASAPLVAAAKCVWLWTSLLSGGAPLPSGESLFLASGNHVSNSEKIQNPVAEPNQTSQPLVLNSENRDGGSQITQNTFTTRRVGDLEPKVKYVLKTDNQPNLSTISSSLPFTGSGGKNNDPLKPAHSPMKQFRKAPHEFFSSEPAVPNGRFTPNLVSNQDCSGNKRGISNEISQDLYHSSLRSKDLDIQPMSGLDGPLPDSHTRTFQPVSPHSDAPKSTTAPILFKIIPKPHNSSNSRNIKSTLICHQQTRDNPNPSTVQNPNLQSLQVSPAGYNPSSGQAFQYENLNPRRPCGSQHLLSPSLTGIVNTSSKNVILRVQGRPPHSEYEQGLVDVILLALNTLKVEKVMPTEANIIDCISYGDSKYRTTDVKKALDCAIKLNEVVKPRLGALEFYIGRFETLWDCVNIIGGNVDQHPKTTWDRIEEFLASSSGRSAILSSQCRYESSIILRKECLTGLVLGEVLQILNMIILVKKWITIHRLYTLHMSICTQKNLNLSRRETREVLLAYDMFLIALHMVHSPEKTCSLKLFVPPVFLSKREVRACAPAIFLKIKWLGA 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0370 743 Gene3D - 18 204 - -
Acco02g0370 743 PANTHER LIMKAIN B LKAP 21 560 IPR024768 GO:0005777|GO:0010468
Acco02g0370 743 MobiDBLite consensus disorder prediction 235 259 - -
Acco02g0370 743 MobiDBLite consensus disorder prediction 389 403 - -
Acco02g0370 743 MobiDBLite consensus disorder prediction 373 404 - -
Acco02g0370 743 Pfam NYN domain 23 196 IPR021139 GO:0004540
Acco02g0370 743 CDD PIN_limkain_b1_N_like 23 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0370 Acco-ChrAcco02 2737861 2740867 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0370 23 281 C2H2 Transcription Factor Family AT5G61190 56.322 6.31e-77 266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g0370 02 2737861 2740867 Acco02g0370 02 2737861 2740867 ECH