Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0368 ATGAACAAGGTATTCCTGCCCGGGGTTGCACTCATATTGGTCGTAGGCTGTGCCCTCGGCACTATTCTTGTCCTCAGACAAGGTAAAAGTAGCGGTGACAGTGGCGGCGGCGGCGGCGGGTTGGCCACTCATAGCAAGGCGGTGACGGCCATATGCCAAGGCTCCAACTACCAGAAGGAATGCGAAGATACTTTGGGGGCCGTCAATTCGACGGACCCAAAAGATTACATCGCCGCGGTGGTAGCGAAAGCAATGCAAAAGGTGATAGGCGCCGCTAACATGAGCGACCAGCTCGCCGTCCAGCATAAATCCGGCGAAGAAGGTGTTAAGATGGCCATAGAAGATTGCAAGGATCTGTTGCAGTCAGCAATTGATTCGCTAGAGGCTTCTAATATGATGATCAAAGGCGGCGATATTAGAAGCATCGAGGACAGAACCGACGACCTCAGGAACTGGTTGGCCATGGTGTTATCTTTCCAACAGTCATGCTACGACGGGTTCGAGGACAAAGGCGGCGAAAAAGATGTGAGAGATACGCTGCACACAGAAGGTGGTCTAGACAGCATACAGAAGCTTACCGTGGTGGCTCTGGATGTTCTCTCCGGCATCAACAATCTGCTTTCTGCATTCAATTTGGATTTGACGGTGAAGGTTCCGTCTCGTCGTCTCCTGGAAGAAGAAGAAGATCCCAGTTGGATGCATGAAGGTGATCGCAAGCTCTTGGGATCCAACCCGAAACCCAACGCAGTGGTGGCCCAAGATGGCAGTGGCCAATTTAAAACCATCGCCGCTGCTATTAAATCGTACCCCAAGAAACACCAAGGCAGATTCGTTATCTACGTCAAAGCTGGAATTTATAAAGAGTACCCGTTAGTTGACAAGAAAAAGCCCAATATTTACATGTACGGAGATGGCCCTACAAAAACCATCGTCACTGGAAACAGATGCGTCGAGCCCAAGAAGAAGTACAAGACCTTCACAAGTGCCACCTTCGCTGTTGCCGGAGACATGTTCATTGCCAAGGGAATAGGATTCGAGAACACAGCTGGATCAGTTGGACATCAAGCAGTGGCGCTCCGGACGCAAGCACCACATGCGGCATTTTACCAGTGCGCATTCCGAGGTTTCCAAGACACCTTGTACGTGCAAGCAGGGATTCAGTTGTTCCGCGAGTGTGAAATAACAGGAACCATCGACTTCATTTTTGGTGCCTCAAGAACTCTGATACAGAAGTCACAGATCATTATGAGGAAGCCAATGGAGAACCAACAGAACATAGTGGTAGCAGATGGGTCCTTGGATCCTAAGGCAGGAACAGGAGTTGTGATTCAGAACAGTGACATCTCCCCAGAGCCAGGGCTTGACAAGAATGTGAATCGTTGCTTCTTGGCAAGGCCATGGAAAGCTTACTCTAAGGCCATCTTCATGGAAAGTACTATTGGTGGTCAGATTCAACCAGATGGATATCTTCCTTGGACTGGTGATATGTTCCTAAAAACATGTTACTTCGCTGAGTATGCCAACACTGGACCTGGTTATAGTCCTAGCACCAGGGTCAAGTGGGGTCGAGGCCAGCTTACAAAGGATCAAGCTTCTGCATATACTGCTACTCGATACCTTGAAGGTGCTGGTGTCCCATGGTTGGCTTCCACTGGTATTCCTTATGATCCTAGCTTCACCAAGTCTTAG 1689 0.495 MNKVFLPGVALILVVGCALGTILVLRQGKSSGDSGGGGGGLATHSKAVTAICQGSNYQKECEDTLGAVNSTDPKDYIAAVVAKAMQKVIGAANMSDQLAVQHKSGEEGVKMAIEDCKDLLQSAIDSLEASNMMIKGGDIRSIEDRTDDLRNWLAMVLSFQQSCYDGFEDKGGEKDVRDTLHTEGGLDSIQKLTVVALDVLSGINNLLSAFNLDLTVKVPSRRLLEEEEDPSWMHEGDRKLLGSNPKPNAVVAQDGSGQFKTIAAAIKSYPKKHQGRFVIYVKAGIYKEYPLVDKKKPNIYMYGDGPTKTIVTGNRCVEPKKKYKTFTSATFAVAGDMFIAKGIGFENTAGSVGHQAVALRTQAPHAAFYQCAFRGFQDTLYVQAGIQLFRECEITGTIDFIFGASRTLIQKSQIIMRKPMENQQNIVVADGSLDPKAGTGVVIQNSDISPEPGLDKNVNRCFLARPWKAYSKAIFMESTIGGQIQPDGYLPWTGDMFLKTCYFAEYANTGPGYSPSTRVKWGRGQLTKDQASAYTATRYLEGAGVPWLASTGIPYDPSFTKS 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0368 562 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 46 175 IPR035513 -
Acco02g0368 562 Gene3D - 242 559 IPR012334 -
Acco02g0368 562 FunFam Pectinesterase 4 245 559 - -
Acco02g0368 562 ProSitePatterns Pectinesterase signature 2. 394 403 IPR033131 -
Acco02g0368 562 Pfam Pectinesterase 248 542 IPR000070 GO:0030599|GO:0042545
Acco02g0368 562 NCBIfam pectinesterase inhibitor domain 43 174 IPR006501 GO:0004857
Acco02g0368 562 CDD PMEI-like_3 50 203 - -
Acco02g0368 562 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Acco02g0368 562 SMART PMEI_2 43 199 IPR006501 GO:0004857
Acco02g0368 562 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 204 IPR035513 -
Acco02g0368 562 SUPERFAMILY Pectin lyase-like 244 555 IPR011050 -
Acco02g0368 562 Pfam Plant invertase/pectin methylesterase inhibitor 47 197 IPR006501 GO:0004857
Acco02g0368 562 PANTHER PECTINESTERASE 17 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0368 Acco-ChrAcco02 2724184 2726265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0368 41 559 Carbohydrate Esterase AT5G49180 39.703 2.86e-122 370