Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0364 ATGGAAGAAAGGAACAAATCTACGGAACCGACAGCACCCAGTACGGGCCATAGTTGGTTGAAAAAAACCAGAGGACTGAGATCCCAGAAAACTGGTTACTTCAGCCTTTCAGGTAGAAAGCAGCCATCTGATATGGGGACGGAGAATGGCTTAGACGAAGCAAGTACGTCCAATAATGAAGCACGAACAAGCACAAATGAAGAAAACAAGAATCCAGCAGAAAAGACAGAGACAGTTCCGTTTCAGAAGTTGTTCACATTTGCCGACTCCGCAGATATATTGTTGATGGTTGTTGGCACCATTGGGGCCATCGGAAATGGTGTGGGTTTGCCCCTCATGACGTTGCTGTTAGGCGATATGATTGATTCCTTCGGAATTAACTCAAATTACCAGACCAGCGCTGACATGGTCCATAAAATTTCCAAGGTTTCTCTGAAGTTTGTGTACTTGGCGATCGGAATTGGAGCTGCAGCTTTTCTCCAGGTGGCATGCTGGATGGTCACTGGGGAGAGACAGGCCGCGAGGATAAGGGGTTTGTATTTGAGAACAATACTAAGACAAGACGTGGCTTTCTTTGATAAGGAAACAAACACCGGAGAGGTGGTGAGTAGAATGTCAGGCGACACTGTTCTTATACAAGACGCCATGGGTGAAAAGGTCGGAAAATTTCTGCAGCTAATATCAACATTCTTTGCCGGTTTTATAATAGCATTTGTAAAAGGTTGGCTTCTCAGTCTTGTCATGTTATCCACTCTTCCACTTATGGTGGTGTGTGGTGCGGCCATGGCCCTCGTTATAGGCAGGATGGCATCCCAGGGCCAAAAGGCTTATGGGAAAGCTGCAAATATCGTTGAACAGACAATTGGTGCAATCAGAACGGTGGCATCCTTCACGGGAGAGAAGCATTCAGCATCTAGTTACGGCAGGTTTCTTGTAGATGCATACAAATCAGGAGTTCGTGAAGGTTTGGTAGCTGGATTGGGTATTGGGACAGTTACGTTCGTAATCTTCTGTGGCTATGCTTTGGCCACATGGTATGGTGGAAAGTTGATACTGGATAATAAAGGAGGATATAATGGGGGTACGGTGATTACTGTGGTCTTTGCCGTCTTAACTGCTTCCATAAATCTTGGTCAAGCAGCCCCTTGTCTGAGTGCTTTTGCGGCAGGCCAAGCGGCAGCTTATAAAATGTTCAGGACTATTGAGAGAAAACCAGAGATAGATTCTTATGATGAAAAAGGGAAAGTATTAGAAGATATTCAGGGGGAAATAGAGTTGTGGGACGTTTATTTCAGTTACCCGGCTAGACCTGGGGAGCTGATTTTTGATGGCTTTTCTCTTAAAATCCCAAGTGGCACTACGGCAGCTTTGGTTGGACAAAGTGGAAGTGGGAAGTCCACTGTCATCAGTTTAATAGAAAGATTTTATGATCCACGGGCAGGTGAAGTTCTCATAGATGGCATTAACTTAAAAGAGTTCCAACTCAGATGGATTAGAGGAAAAATTGGGCTTGTCAGCCAAGAGCCTGTCCTTTTTGCATCCAGCATTAAGGATAACATTGCTTATGGAAAAGAAGGAGCAACAACTGAAGAGATAAAAGCTGCAGCTGAACTTGCAAATGCAGCTAAATTCATTGATAAATTACCACAGGGATTGGACACAATGGTTGGAGACCATGGAACTCAGTTGTCTGGGGGACAGAAGCAGCGCATTGCCATTGCAAGAGCAATTCTGAAAAATCCGAAAATCCTACTTCTAGATGAAGCTACGAGTGCTCTTGATGCAGAGTCTGAAAGGATTGTGCAAGAGGCTCTAGACAGGATCATGGTAGACAGGACTACTGTTGTTGTGGCACACCGCCTAAGCACGGTGAAAAATGCCGATATGATTGCTGTTATTCACAGAGGAAAGATGGTCGAGAAAGGAACACACACAGAATTGCTCAAGGATCCTGAAGGAGCATACTCTCAGCTTATACGCCTACAAGAAGTAAATAAGGAGGCAGAAGATAGTGCAGATCATGAAAACAAGAGTGAACATTCCTCAGAGTCCTTAAGGCGTTCTACTAGTCAGATAAGGTCATTAGGAAGATCCATAAGTCGGGGATCATCGGCGGGAAACAGCAGCCGCCACTCATTTTCAGTTGCGTTTGGCTTGCCTACTACTACAGTTAACAACAACAACACTGATCCCGAACAAAGTCCAGAAACTAAAGAACAAGCACCTAAGGTTCCACTTCGCCGCCTTGCTTACCTCAACAAGCCAGAGATCCCTGTGCTGATGCTTGGATCTTTAGCTGCCATAGTGAATGGTGCCGTACTTCCTGTATTTGGCATTTTGATCTCCGGTGCAATTAAATCATTCTACGAGCCATCTGAACAAATGAAAAAGGATACTAGGCTTTGGGCATTAATGTTTATGGTGCTTGGTATTGTATCTCTTTTGGCACTTCCTTCAAGAGGATATCTTTTTGCCGTTGCCGGATGTAAGTTAATCCAACGCATTAGGCAAATGTGCTTTGAGAAAGTAGTAAACATGGAGATTAGCTGGTTTGATGATCCTGAGCACTCAAGTGGTGTAATTGGAGCAAGACTCTCAGGAGACGCAGCATCTGTGCGTGCACTTGTTGGGGATGCTCTGGGACAACTGGTCGAGAATCTCTCTTCATTACTGGCTGGTTTGATAATTGCTTTCATTGCAAGCTGGCAGTTAGCTTTGATTATTCTTGTTTTGATTCCCTTGATCGGAGTAAACGGATATGTTCAAGTGGAATTCATGAAAGGCTTCAGTGCTGACGCAAAGATGATGTACGAGGAAGCAAGTCAAGTTGCTACTGATGCAGTGGGAAGTATAAGAACAGTAGCTTCTTTTTGTGCTGAAGAGAAGGTGATGGCACTATATAGTAAGAAATGTGAAGGGCCAATGAAATCTGGGATTCGTCAGGGTTTGATCAGTGGAACAGGATTTGGGTTATCGTTTTTCTTACTCTTCTGCGTCTATGCAACCAGCTTTTATGCGGGAGCTCAACTTGTGAAGCACGGCAAAGCCACATTCTTAGATGTTTTCCGGGTTTTCTTTGCTTTAACTATGGCGGCTTTAGCAGTTTCCCAATCAAGCTCTCTCGCTCCTGATTCTGGCAAAGCCAAGGTAGCTGCTGCTTCTATATTTGAAATAATTGACAGGAAATCGATGATAGATCCAAGCGACGAGTCAGGAACCACATTGGATAGCGTAAAAGGAGAAATTGAGCTTCGTCATGTTAGCTTTAACTATCCATCCAGGCCAGACGTACAGATTTTCAGAGACCTTAGCTTGGCCATACATTCCGGAAAGACGGTGGCCCTTGTTGGTGAAAGTGGAAGTGGAAAATCTACGGTGATTTCATTGTTGCAGAGATTTTACGATCCTGATTCAGGTTCCATCACACTTGATGGGATAGAGATTCAAAAGTTCCAACTTAAATGGTTAAGGCAACAAATGGGTCTTGTGAGCCAAGAGCCAATATTGTTCAATGAGACTATTCGTGCCAATATTGCCTATGGAAAGGGAGGCAATGCAACAGAAGGAGAGATCATAGCTGCAGCCGAACTGGCCAATGCTCATAAGTTCATCAGTGGCTTACAACAAGGGTATGATACAGTAGTGGGAGAAAGGGGGATTCAATTATCAGGTGGGCAAAAGCAGAGAGTGGCAATAGCACGTGCTATAATTAAAAGTCCAAAGATTTTGTTATTAGATGAAGCAACAAGTGCGCTGGACGCAGAGTCAGAGAGGGTAGTTCAAGATGCATTGGACAAAGTGATGGTGAATAGAACAACTGTGGTGGTGGCACATCGTTTATCTACAATAAAGAACGCAGATGTTATAGCAGTGGTTAAGAACGGAGTCATAGTTGAGAAAGGAAGACATGAGACTTTGATTAAGATCAAGGATGGATTCTATGCCTCTTTAGTCCAACTTCATGCGAGCGCTTCAACATCATGA 3984 0.4408 MEERNKSTEPTAPSTGHSWLKKTRGLRSQKTGYFSLSGRKQPSDMGTENGLDEASTSNNEARTSTNEENKNPAEKTETVPFQKLFTFADSADILLMVVGTIGAIGNGVGLPLMTLLLGDMIDSFGINSNYQTSADMVHKISKVSLKFVYLAIGIGAAAFLQVACWMVTGERQAARIRGLYLRTILRQDVAFFDKETNTGEVVSRMSGDTVLIQDAMGEKVGKFLQLISTFFAGFIIAFVKGWLLSLVMLSTLPLMVVCGAAMALVIGRMASQGQKAYGKAANIVEQTIGAIRTVASFTGEKHSASSYGRFLVDAYKSGVREGLVAGLGIGTVTFVIFCGYALATWYGGKLILDNKGGYNGGTVITVVFAVLTASINLGQAAPCLSAFAAGQAAAYKMFRTIERKPEIDSYDEKGKVLEDIQGEIELWDVYFSYPARPGELIFDGFSLKIPSGTTAALVGQSGSGKSTVISLIERFYDPRAGEVLIDGINLKEFQLRWIRGKIGLVSQEPVLFASSIKDNIAYGKEGATTEEIKAAAELANAAKFIDKLPQGLDTMVGDHGTQLSGGQKQRIAIARAILKNPKILLLDEATSALDAESERIVQEALDRIMVDRTTVVVAHRLSTVKNADMIAVIHRGKMVEKGTHTELLKDPEGAYSQLIRLQEVNKEAEDSADHENKSEHSSESLRRSTSQIRSLGRSISRGSSAGNSSRHSFSVAFGLPTTTVNNNNTDPEQSPETKEQAPKVPLRRLAYLNKPEIPVLMLGSLAAIVNGAVLPVFGILISGAIKSFYEPSEQMKKDTRLWALMFMVLGIVSLLALPSRGYLFAVAGCKLIQRIRQMCFEKVVNMEISWFDDPEHSSGVIGARLSGDAASVRALVGDALGQLVENLSSLLAGLIIAFIASWQLALIILVLIPLIGVNGYVQVEFMKGFSADAKMMYEEASQVATDAVGSIRTVASFCAEEKVMALYSKKCEGPMKSGIRQGLISGTGFGLSFFLLFCVYATSFYAGAQLVKHGKATFLDVFRVFFALTMAALAVSQSSSLAPDSGKAKVAAASIFEIIDRKSMIDPSDESGTTLDSVKGEIELRHVSFNYPSRPDVQIFRDLSLAIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGSITLDGIEIQKFQLKWLRQQMGLVSQEPILFNETIRANIAYGKGGNATEGEIIAAAELANAHKFISGLQQGYDTVVGERGIQLSGGQKQRVAIARAIIKSPKILLLDEATSALDAESERVVQDALDKVMVNRTTVVVAHRLSTIKNADVIAVVKNGVIVEKGRHETLIKIKDGFYASLVQLHASASTS 1327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0364 1327 Gene3D ABC transporter type 1, transmembrane domain 145 1056 IPR036640 GO:0005524|GO:0016020
Acco02g0364 1327 Pfam ABC transporter transmembrane region 97 374 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g0364 1327 Pfam ABC transporter transmembrane region 761 1032 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g0364 1327 MobiDBLite consensus disorder prediction 28 66 - -
Acco02g0364 1327 MobiDBLite consensus disorder prediction 665 686 - -
Acco02g0364 1327 ProSitePatterns ABC transporters family signature. 1222 1236 IPR017871 GO:0005524|GO:0016887
Acco02g0364 1327 CDD ABC_MTABC3_MDL1_MDL2 1082 1320 - -
Acco02g0364 1327 SUPERFAMILY ABC transporter transmembrane region 83 408 IPR036640 GO:0005524|GO:0016020
Acco02g0364 1327 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 762 1047 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g0364 1327 ProSitePatterns ABC transporters family signature. 563 577 IPR017871 GO:0005524|GO:0016887
Acco02g0364 1327 Pfam ABC transporter 1101 1250 IPR003439 GO:0005524
Acco02g0364 1327 Gene3D - 422 675 IPR027417 -
Acco02g0364 1327 CDD ABC_6TM_Pgp_ABCB1_D1_like 96 385 - -
Acco02g0364 1327 Pfam ABC transporter 443 591 IPR003439 GO:0005524
Acco02g0364 1327 SMART AAA_5 451 623 IPR003593 GO:0016887
Acco02g0364 1327 SMART AAA_5 1109 1302 IPR003593 GO:0016887
Acco02g0364 1327 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 97 389 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Acco02g0364 1327 MobiDBLite consensus disorder prediction 687 735 - -
Acco02g0364 1327 CDD ABC_6TM_Pgp_ABCB1_D2_like 750 1065 - -
Acco02g0364 1327 MobiDBLite consensus disorder prediction 8 22 - -
Acco02g0364 1327 FunFam ABC transporter B family member 9 83 420 - -
Acco02g0364 1327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1072 1320 IPR027417 -
Acco02g0364 1327 FunFam ABC transporter B family member 9 1049 1071 - -
Acco02g0364 1327 FunFam ABC transporter B family member 1 740 1048 - -
Acco02g0364 1327 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1082 1319 IPR003439 GO:0005524
Acco02g0364 1327 Gene3D - 1072 1326 IPR027417 -
Acco02g0364 1327 FunFam ABC transporter B family member 1 414 663 - -
Acco02g0364 1327 MobiDBLite consensus disorder prediction 1 76 - -
Acco02g0364 1327 MobiDBLite consensus disorder prediction 665 742 - -
Acco02g0364 1327 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 424 660 IPR003439 GO:0005524
Acco02g0364 1327 SUPERFAMILY ABC transporter transmembrane region 742 1066 IPR036640 GO:0005524|GO:0016020
Acco02g0364 1327 PANTHER ABC TRANSPORTER B FAMILY 60 665 IPR039421 -
Acco02g0364 1327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 414 662 IPR027417 -
Acco02g0364 1327 FunFam ABC transporter B family member 1 1072 1322 - -
Acco02g0364 1327 CDD ABC_MTABC3_MDL1_MDL2 424 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0364 Acco-ChrAcco02 2686361 2696525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0364 79 1321 Calmodulin-binding Proteins AT2G36910 45.810 0.0 1080