Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0355 ATGGCAGCCTCCAGATTCTCCTCCGTTTCTTCTTTCTTCTTCATCTTCTCTGCTTTGTTACTCTGCTTTCCCTACTTTGCATCTTTGGGAGCCGAGGCTCGTCATGATCCCTGTCCCATTTCGTCTCTCATACACAAAAAGCTCTTTAAAACCTTCTTCCTCCACAAAGATGATTCTGCGTGCCCTGCCAAAGACTTCTACACCTACAAGTCTTTCATTCACGCCGCCAAATCCTTCCCCGAGTTTGGCACCACTGGAACTATAACCACGCGAAAGCGTGAGATCGCTGCATTTCTTGCTCAGATCTCCCACGAGACCACCGGTGGGTGGGCCACCGCACCTGATGGACCCTTCGCCTGGGGCTTGTGCTACAAGGAAGAACTTAAGCCTCAGAGTAATTACTGCGACTCCAACAACACTCAATGGCCTTGTTACCCTAGCAAAAGCTACTATGGCAGAGGACCCATTCAACTCTCCTGGAACTATAACTATGGGCCAGCTGGGAAGGCATTGGGATTTAATGGGCTGAGGAATCCTGAAATCGTAGCCAACAATTCAGTGATTGCGTTTAAGACGGCTCTCTGGTTTTGGATGACAGAGCGAGAGCCGATACCTTCTCCCCACAATGTGATGGTGGGGAAATATGTTCCGACTCAAGCTGATATAGCGGCTAATCGTACGGCTGGCTACGGGTTGGTGACCAACATAATCAACGGTGGATTAGAGTGTGGAATCCCTAACGACCCAAGAGTGAATGATCGTATCGGGTTCTTCCAAAGATATGCCAAGTTGCTTAACGTGGACACAGGACCTAATGTGGATTGCGCTCATCAGAAATCATTTTAA 846 0.487 MAASRFSSVSSFFFIFSALLLCFPYFASLGAEARHDPCPISSLIHKKLFKTFFLHKDDSACPAKDFYTYKSFIHAAKSFPEFGTTGTITTRKREIAAFLAQISHETTGGWATAPDGPFAWGLCYKEELKPQSNYCDSNNTQWPCYPSKSYYGRGPIQLSWNYNYGPAGKALGFNGLRNPEIVANNSVIAFKTALWFWMTEREPIPSPHNVMVGKYVPTQADIAANRTAGYGLVTNIINGGLECGIPNDPRVNDRIGFFQRYAKLLNVDTGPNVDCAHQKSF 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0355 281 PANTHER CHITINASE-RELATED 38 279 - -
Acco02g0355 281 SUPERFAMILY Lysozyme-like 40 281 IPR023346 -
Acco02g0355 281 Gene3D Endochitinase, domain 2 126 184 - -
Acco02g0355 281 Gene3D - 47 281 - -
Acco02g0355 281 Pfam Chitinase class I 43 275 IPR000726 GO:0004568|GO:0006032|GO:0016998
Acco02g0355 281 CDD chitinase_GH19 46 275 - -
Acco02g0355 281 PIRSF Endochitinase 17 281 IPR016283 GO:0004568|GO:0005975
Acco02g0355 281 ProSitePatterns Chitinases family 19 signature 2. 188 198 IPR000726 GO:0004568|GO:0006032|GO:0016998
Acco02g0355 281 FunFam Endochitinase (Chitinase) 126 184 - -
Acco02g0355 281 ProSitePatterns Chitinases family 19 signature 1. 61 83 IPR000726 GO:0004568|GO:0006032|GO:0016998
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0355 Acco-ChrAcco02 2617324 2618272 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0355 34 281 Glycoside Hydrolase AT4G01700 70.161 2.12e-138 390