Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0338 ATGGAGTGGAACATTATATGGGTGAGGAACTTGGTGTTGATGGCTTTAACAGTGGCCTTGGTTGTTGCAAATGGGAATTGTTACAAGGGTGGTGGTTATGATCAGTCAGGAAGCAAATTTGTTCAACGAGATGGAACCCATTTTACAATGAATGGGAAGCGCATGTACCTGAATGGGTTCAATGCTTACTGGTTCATGTACATGGCATCTGACCCATCCACAAGATCCAAGGTCTCTACCACTTTACAACAAGCTTCACTCCATGGCATGAACGTGGCTAGAACCTGGGCTTTCAGCGATGCAGGTTATAGGTCTCTTCAGGTTTCTCCTGGTTCCTACGACGAGAACGTCTTCAGGGGGTTGGATTTTGTGATATCGGAAGCTGGGAAATATGGGGTGAGACTCATACTGAGCCTGGTGAACAATTGGAAAGATTATGGCGGGAAAAGTCAGTATGTGAAATGGGCAAGTGAACGTGGTCAGAGAGTGAGCAACGACGATGGCTTCTTTTCCCACCCTGTGGTTAAGCAATATTACAAGAATCATATTAAGGCTGTGTTGAGTCGAAGGAACACAATAACAGGGGTGGCATATAAAGACGATCCAGCTATTTTCGCGTGGGAACTAATGAATGAACCTCGTTCTGAATTTGATAAATCTGGGAAAATAATTCAGGATTGGGTGAGTGAGATGGCTGCGTACGTAAAGTCTATTGATAGCAATCATTTGCTGGAAATAGGGCTCGAAGGCTTTTACGGGGAATCAGTACCAAATAGGAGGCCCTTCAATCCTGGATCCGTATTAGTTGGAACCGATTTCATTTCCAACAATAGAGTTCCTCACATCGACTTTGCCACCATTCATCTCTACCCAGAACAATGGGTACCCGGGTCAAACGAATCGGCCCAATCTGATTTTGTGGACAAATGGGTCCAGGCTCATATCAATGACTGTAACGATATCCTGAGGAAGCCCATTCTGTTGAGTGAGTTTGGGAAGTCGTCCAAGTCTGAGGGATATAGCCTGGAGAAGAGGAACAAGTACTTTCAGAAGCTTTACGACGCCGTGTACGGCAGTGCAAGGAGCGGAGGGTCATGTGGAGGTGGCCTTTTCTGGCACGTCATGGCGCAAGGAATGGATGGCTTTCACGACGGATACGAAGTTATCCTTCAGGATAGCTCTTCAACTATCAACATCATCCGCCAACAATCTCAACGCATGTCATCTCTCAATTAG 1236 0.4587 MEWNIIWVRNLVLMALTVALVVANGNCYKGGGYDQSGSKFVQRDGTHFTMNGKRMYLNGFNAYWFMYMASDPSTRSKVSTTLQQASLHGMNVARTWAFSDAGYRSLQVSPGSYDENVFRGLDFVISEAGKYGVRLILSLVNNWKDYGGKSQYVKWASERGQRVSNDDGFFSHPVVKQYYKNHIKAVLSRRNTITGVAYKDDPAIFAWELMNEPRSEFDKSGKIIQDWVSEMAAYVKSIDSNHLLEIGLEGFYGESVPNRRPFNPGSVLVGTDFISNNRVPHIDFATIHLYPEQWVPGSNESAQSDFVDKWVQAHINDCNDILRKPILLSEFGKSSKSEGYSLEKRNKYFQKLYDAVYGSARSGGSCGGGLFWHVMAQGMDGFHDGYEVILQDSSSTINIIRQQSQRMSSLN 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0338 411 Gene3D Glycosidases 36 411 - -
Acco02g0338 411 FunFam Mannan endo-1,4-beta-mannosidase 6 37 411 - -
Acco02g0338 411 SUPERFAMILY (Trans)glycosidases 40 399 IPR017853 -
Acco02g0338 411 Pfam Cellulase (glycosyl hydrolase family 5) 51 350 IPR001547 GO:0004553|GO:0071704
Acco02g0338 411 PANTHER - 11 410 IPR045053 GO:0004553
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0338 Acco-ChrAcco02 2508817 2510805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0338 40 410 Glycoside Hydrolase AT1G02310 56.764 1.72e-163 464