Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0335 ATGAATGTATCACTCTCTGTCAATGACCTGCTCTCGTGCTGTGGATTTTTGTGTGGATCTGGCTGTGACGGAGGTTATACCCTCAATGCCTGGCAATACCTTGTCCGCCAGGGTGTTGTTACTGAAGAGTGTGACCCATACTTCGATCAGATTGGTTGTTCTCACCCTGGTTGTGAGCCTGCATATCCGACACCTGTGTGTGTAAGAAAGTGCGCCAATGGTAACCAGCTTTGGAGCCAGTCAAAGCACTACAGCGATAATGCATATATGGTCAACTCTGATCCTTATGATATCATGACAGAAGTTTTTAAGAATGGGCCGGTTGAGGTCTCTTTCACAGTTTATGAGGATTTTGCTCACTACAGCTCAGGAGTATATAAACACGTCACAGGTTCCGTGATGGGAGGTCATGCTGTAAAGCTAATTGGGTGGGGAACCAGCGATGATGGAGAGGACTATTGGCTTCTCGCAAATCAGTGGAATAGAAGTTGGGGTGATGATGGTTACTTTAAGATCAGAAGAGGCACAAACGAGTGTGGTATTGAAGAAGAGGTTGTTGCGGGTATGCCTTCCACTAAAAATCTTGTGTTGGAGGTGGCTGGCGTGGACGACGATGCTGTTGTTTCATTCTGA 633 0.4645 MNVSLSVNDLLSCCGFLCGSGCDGGYTLNAWQYLVRQGVVTEECDPYFDQIGCSHPGCEPAYPTPVCVRKCANGNQLWSQSKHYSDNAYMVNSDPYDIMTEVFKNGPVEVSFTVYEDFAHYSSGVYKHVTGSVMGGHAVKLIGWGTSDDGEDYWLLANQWNRSWGDDGYFKIRRGTNECGIEEEVVAGMPSTKNLVLEVAGVDDDAVVSF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0335 210 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 3 182 IPR013128 GO:0008234
Acco02g0335 210 FunFam cathepsin B-like protease 2 1 195 - -
Acco02g0335 210 Gene3D Cysteine proteinases 1 198 - -
Acco02g0335 210 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 135 145 IPR025660 -
Acco02g0335 210 SUPERFAMILY Cysteine proteinases 2 190 IPR038765 -
Acco02g0335 210 CDD Peptidase_C1A_CathepsinB 1 188 - -
Acco02g0335 210 SMART pept_c1 2 189 IPR000668 GO:0006508|GO:0008234
Acco02g0335 210 Pfam Papain family cysteine protease 2 188 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0335 Acco-ChrAcco02 2487390 2489623 Transposed