Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0324 ATGTATGATTTAAGCCCAGCCCACTCAGGCATTGGATTTGAGGAACTTTCCAAGTTTTATCTGACTTATTTGCTTCTAGAAGAGAGCGTTCACTTGTTCCACCCTGCGGCGAAACCCTTTGGCTTACCTTTACTTCGTGAATTTTGGCCTGTCTTAGATTTGTTTGCAGATTTTCTCCGCCTCCACCCAGGGTTTGTATATATATGTATGGCGTGGAGAGAGCTAGGAAGAAAGAGAATATATATTAACTTTGCCAGAGCTTTGGCCAGAGTACCATCTAGGCATGTTGCACGGTCATGTTATTCATCCACCTTTGCAGCAAAATCTGTTTATGCATCTGCAGGATGTTTGACTGAGTTTACCAGTCACCCATCTGCTGTAGCAGCTGGTTTTTGCAACGGAACAATAGAACGTGGAATACAATACAGGTGGCTCCATGCTAATCCAGAACTATTGGCGAGGAGAAATGACGAGTTATTTGGTTTGAAGACTCCAAAGAAGGAGAAGCGTGTGAGAAGGGACAGTAAAAATCAACCCCCTGTTGAAGCTCCATATGTTCCTAGTAATGTGGTCAAATCTATCAAATCCGTTCCTGATAAAACAATTGAAATATTTGAAGGCATGACTATTGCTGAGTTGGCAAAGCGTACTGGAAAGTCAGTATCTTCTCTGCAAGATATTCTAGTAAATGTCGGGGAAAAGGTTGAATCAGAGTTTGAGCCTCTCAGTGTTGATATTGCAGAACTTATTGCAATGGAAGTTGGTGTCAACGTGAAGAGGCTACATTCTACTGAAGGTTCAGAGATTTTACCCCGGCCTGCAGTTGTAACAGTGATGGGTCATGTTGATCATGGTAAAACCTCCCTTCTCGATGCTTTACGCCAAACATCAGTGGCAGCCAAGGAGGCTGGGGGTATAACTCAGCATCTAGGTGCCTTTGTGGTGGCCATGCCATCAGGAGCATCAATCACATTTCTGGACACACCTGGTCATGCTGCATTTAGTGCAATGCGGGCAAGAGGTGCTGCAGTTACAGATGTGGTGGTACTCGTTGTTGCTGCAGATGATGGTGTGATGCCTCAAACACTTGAAGCTATATCCCATGCAAAAGCGGCTAACGTACCAATAGTAGTTGCAATAAATAAATGTGATAAACCGGGAGCAAATCCTGAAAAAGTAAAACTTCAGCTTGCATCAGAGGGCTTGTTGCTGGAAGAGATGGGTGGGGATGTTCAGGTGGTTGAAGTTTCTGCAACTATGAAAACTGGGCTCGATAACTTGGAGGAAGCTTTGCTCCTTCAGGCTGAAGTGATGGATCTAAAAGCTCGAATTGATGGCCCTGCCCAAGCTTATGTGGTGGAAGCAAGGCTTGATAGAGGACGGGGTCCATTGGCTACTGCTATTGTAAAGGCAGGGACTCTAGTTTGTGGTCAGCATGTGGTTATAGGCTCAGAATGGGGCAAAATAAGGGCTATTAGAGAAGTAACGGGTAAGTTGACTGACAGAGCAACACCTGCAATGCCTGTTGAGATTGAAGGGCTTCGGGGAACACCCATGGCTGGTGATGATGTTATTGTTGTTCAGTCTGAGGAGCGAGCACGATTGCTTAGTGCTGGTAGGAAAAGGAAATATGAGGAGGATAGGCTTAAGAAAATGGTTGAGGAAAGGGCAGATTCTGTGGAGTCATCTGAGGATGGTCCTCAGAGGGTTGAATTGCCCATAGTAGTGAAAGCTGATGTTCAGGGCACTGTTCAGGCTGTCACAGATGCGTTGAGAACTTTAAATAGTTCTCAGGTTTTCGTGAACGTTGTCCATGTTGGTGTAGGGCCTATTTCTCAATCTGATGTGGACCTAGCTCAGGCTTGCGGTGCATGCATAGTTGGATTCAGTGTGAAGAGTCCACCTGGTCCTGTTAGTCAGGCAGCAGGCCGTGCCAATATAAAGATAGTACTTCACCGTGTGATTTACCACCTCTTGGAGGAGATGGGCGATTTGATAATAGAGAAGGCTCCAGGGACACCTGAAACGCAGGTAGCCGGGGAGGCAGAGGTGCTGAATGTATTTGAGCTTAAAGGAAGGAGCAAGTCCAAGGGGCCTGACGTGAAGATAGCCGGCTGCCGGGTTATCGACGGTTGTGTGACAAAATCAGGAACCATGAGGCTTCTGAGGAGTGGGGAAGTGATGTTTGAAGGAAACTGTGCGTCTCTGAGAAGGGAAACCCAGGACGTGGATGCAGTGAAGAAGGGAAGTGAGTGTGGACTGGTAATAAATGACTGGCACGATTTCCAGGTTGGAGATGTCATACAATGCTTGGAACAAGTGGTGAGGAAGCCCAGGTTCATTAAATCGCAGAGTGGAGCTGTTCGAATTGAGTGTTGA 2379 0.4628 MYDLSPAHSGIGFEELSKFYLTYLLLEESVHLFHPAAKPFGLPLLREFWPVLDLFADFLRLHPGFVYICMAWRELGRKRIYINFARALARVPSRHVARSCYSSTFAAKSVYASAGCLTEFTSHPSAVAAGFCNGTIERGIQYRWLHANPELLARRNDELFGLKTPKKEKRVRRDSKNQPPVEAPYVPSNVVKSIKSVPDKTIEIFEGMTIAELAKRTGKSVSSLQDILVNVGEKVESEFEPLSVDIAELIAMEVGVNVKRLHSTEGSEILPRPAVVTVMGHVDHGKTSLLDALRQTSVAAKEAGGITQHLGAFVVAMPSGASITFLDTPGHAAFSAMRARGAAVTDVVVLVVAADDGVMPQTLEAISHAKAANVPIVVAINKCDKPGANPEKVKLQLASEGLLLEEMGGDVQVVEVSATMKTGLDNLEEALLLQAEVMDLKARIDGPAQAYVVEARLDRGRGPLATAIVKAGTLVCGQHVVIGSEWGKIRAIREVTGKLTDRATPAMPVEIEGLRGTPMAGDDVIVVQSEERARLLSAGRKRKYEEDRLKKMVEERADSVESSEDGPQRVELPIVVKADVQGTVQAVTDALRTLNSSQVFVNVVHVGVGPISQSDVDLAQACGACIVGFSVKSPPGPVSQAAGRANIKIVLHRVIYHLLEEMGDLIIEKAPGTPETQVAGEAEVLNVFELKGRSKSKGPDVKIAGCRVIDGCVTKSGTMRLLRSGEVMFEGNCASLRRETQDVDAVKKGSECGLVINDWHDFQVGDVIQCLEQVVRKPRFIKSQSGAVRIEC 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0324 792 Pfam Translation-initiation factor 2 550 662 IPR023115 -
Acco02g0324 792 Pfam Elongation factor Tu GTP binding domain 276 432 IPR000795 GO:0003924|GO:0005525
Acco02g0324 792 FunFam Translation initiation factor IF-2 268 443 - -
Acco02g0324 792 NCBIfam small GTP-binding protein domain 274 425 IPR005225 GO:0005525
Acco02g0324 792 SUPERFAMILY Translation proteins 675 776 IPR009000 -
Acco02g0324 792 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 193 787 IPR015760 -
Acco02g0324 792 Gene3D - 568 672 IPR036925 -
Acco02g0324 792 CDD IF2_eIF5B 275 438 - -
Acco02g0324 792 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 560 679 IPR036925 -
Acco02g0324 792 CDD mtIF2_IVc 680 770 - -
Acco02g0324 792 SUPERFAMILY Translation proteins 445 527 IPR009000 -
Acco02g0324 792 FunFam Translation initiation factor IF-2 675 779 - -
Acco02g0324 792 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 271 441 IPR000795 GO:0003924|GO:0005525
Acco02g0324 792 FunFam Translation initiation factor IF-2 567 673 - -
Acco02g0324 792 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 270 441 IPR027417 -
Acco02g0324 792 NCBIfam translation initiation factor IF-2 199 775 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Acco02g0324 792 Gene3D Translation factors 444 562 - -
Acco02g0324 792 Gene3D Translation factors 675 777 - -
Acco02g0324 792 CDD IF2_mtIF2_II 447 542 IPR044145 -
Acco02g0324 792 Hamap Translation initiation factor IF-2 [infB]. 14 778 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Acco02g0324 792 Gene3D - 269 443 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0324 Acco-ChrAcco02 2372175 2379783 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0324 272 662 Eukaryotic Initiation Factors Gene Family AT1G21160 28.070 8.54e-26 112