Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco02g0320 ATGAAGTTCTCCTGCTCTCTGCTTCTGCTTCCTCTCGCTCTGCTTTTCTCTGCTGTCATCGCCTCTGATCCCGACCCTCTCCAAGACATCTGTGTCGCCGATCTAACCTCCGCGGTTAAAGTAAACGGGTTCGTGTGCAAAGATGCTGCGAAGGTGAATGCGTCAGATTTCTTCTCCAACATACTGGCAAAACGAGGAGCCACCAATAACACGTTTGGCTCGTTGGTCACCGGAGCCAACGTTGAGAAAGTCCCTGGACTCAACACCCTCGGCGTCTCACTCTCACGCATTGACTACGCCCCTGGTGGCATCAACCCACCCCACACGCACCCCCGCGGCACCGAGATGATTTTTGTGCTGGAAGGTAAACTTTTTGTCGGCTTCATAACCACCTCCAACCAGCTCATATCCAAGAAGATTCAGAAGGGCGAGGTGTTTGTGTTCCCCAAAGGTTTGGTTCATTTCCAAAAGAACGTTGGGCATGCAGCTGCCTCTGTAATCGCAGCATTCAATAGTCAGCTTCCTGGTACGCAGTCCATCGCCACCACCTTGTTCGCCGCCACACCGCCGGTGCCCGACAATGTTTTGGCGCAGGCGTTCCAGGTGAGTACCAAGGAGGTTGACAAAATCAAGTCTGGGCTTGCACCCAAGAAGCAGTAG 660 0.5333 MKFSCSLLLLPLALLFSAVIASDPDPLQDICVADLTSAVKVNGFVCKDAAKVNASDFFSNILAKRGATNNTFGSLVTGANVEKVPGLNTLGVSLSRIDYAPGGINPPHTHPRGTEMIFVLEGKLFVGFITTSNQLISKKIQKGEVFVFPKGLVHFQKNVGHAAASVIAAFNSQLPGTQSIATTLFAATPPVPDNVLAQAFQVSTKEVDKIKSGLAPKKQ 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco02g0320 219 SMART Cupin_1_3 59 208 IPR006045 -
Acco02g0320 219 FunFam germin-like protein subfamily 2 member 1 22 216 - -
Acco02g0320 219 SUPERFAMILY RmlC-like cupins 23 213 IPR011051 -
Acco02g0320 219 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 17 212 - -
Acco02g0320 219 ProSitePatterns Germin family signature. 103 116 IPR019780 GO:0030145
Acco02g0320 219 Gene3D Jelly Rolls 22 216 IPR014710 -
Acco02g0320 219 PRINTS Germin signature 108 128 IPR001929 GO:0030145
Acco02g0320 219 PRINTS Germin signature 171 186 IPR001929 GO:0030145
Acco02g0320 219 PRINTS Germin signature 138 158 IPR001929 GO:0030145
Acco02g0320 219 Pfam Cupin 61 207 IPR006045 -
Acco02g0320 219 CDD cupin_OxOx 23 214 IPR001929 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco02g0320 Acco-ChrAcco02 2348799 2349679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco02g0320 9 218 Miscellaneous Gene Families AT3G05930 58.140 4.18e-87 254